Inferring microbial interactions with their environment from genomic and metagenomic data.

Autor: James D Brunner, Laverne A Gallegos-Graves, Marie E Kroeger

Publikováno v: PLoS Computational Biology, Vol 19, Iss 11, p e1011661 (2023)

Microbial communities assemble through a complex set of interactions between microbes and their environment, and the resulting metabolic impact on the host ecosystem can be profound. Microbial activity is known to impact human health, plant growth, w

Externí odkaz: https://doaj.org/article/53143ee0a5764707a0849996302d05e7

Soil Bacterial and Fungal Richness Forecast Patterns of Early Pine Litter Decomposition

Autor: Michaeline B. N. Albright, Renee Johansen, Jaron Thompson, Deanna Lopez, La V. Gallegos-Graves, Marie E. Kroeger, Andreas Runde, Rebecca C. Mueller, Alex Washburne, Brian Munsky, Thomas Yoshida, John Dunbar

Publikováno v: Frontiers in Microbiology, Vol 11 (2020)

Discovering widespread microbial processes that drive unexpected variation in carbon cycling may improve modeling and management of soil carbon (Prescott, 2010; Wieder et al., 2015a, 2018). A first step is to identify community features linked to car

Externí odkaz: https://doaj.org/article/c0bf3305fa3e492a9dd6717c65108a53

Simulated nitrogen deposition and precipitation events alter microbial carbon cycling during early stages of litter decomposition

Autor: Marie E. Kroeger, Renée Z. Wang, Dennis Suazo, Thomas Yoshida, Michaeline B.N. Albright, John Dunbar

Plant litter decomposition is a major nutrient input to terrestrial ecosystems that is primarily driven by microorganisms. Litter decomposition results in a flow of dissolved organic carbon (DOC) that links above-ground decomposition to below-ground

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::7394fe68999d11e8f2c0548ac77e5c6a
https://doi.org/10.21203/rs.3.rs-2086262/v1

Microbial community composition controls carbon flux across litter types in early phase of litter decomposition

Autor: Michaeline B. N. Albright, Brian Munsky, Andreas Runde, Deanna Lopez, Renee Johansen, Sanna Sevanto, La Verne Gallegos-Graves, Marie E Kroeger, Jaron Thompson, John Dunbar, M. Rae DeVan, Thomas M. Yoshida

Publikováno v: Environmental microbiology. 23(11)

Leaf litter decomposition is a major carbon input to soil, making it a target for increasing soil carbon storage through microbiome engineering. We expand upon previous findings to show with multiple leaf litter types that microbial composition can d

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b362399b2ce86c53272b96213071b9d4
https://pubmed.ncbi.nlm.nih.gov/34390621

Belowground changes to community structure alter methane-cycling dynamics in Amazonia

Autor: Ann M. Klein, Fernanda Nakamura, Andreas Braendholt, Andrew H. Morris, Plínio Barbosa de Camargo, Brendan J. M. Bohannan, Kyle M. Meyer, Rachel E. Danielson, Leandro Fonseca de Souza, Joost van Haren, Jose M.S. de Mauro, Katherine L. Shek, Siu Mui Tsai, Jorge L. M. Rodrigues, Marie E Kroeger, Fernando Dini-Andreote, Erika Berenguer, Scott R. Saleska, Andressa Monteiro Venturini, Jos Barlow, Kevin D. Webster, Laura Meredith, Klaus Nüsslein

Publikováno v: Environment International, Vol 145, Iss, Pp 106131-(2020)
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP

Amazonian rainforest is undergoing increasing rates of deforestation, driven primarily by cattle pasture expansion. Forest-to-pasture conversion has been associated with increases in soil methane (CH4) emission. To better understand the drivers of th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7528a04bfc94eb4beee203a376bc6896
https://escholarship.org/uc/item/3g8449vj