Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Maria Brbić"'
Autor:
Sheng Wang, Angela Oliveira Pisco, Aaron McGeever, Maria Brbic, Marinka Zitnik, Spyros Darmanis, Jure Leskovec, Jim Karkanias, Russ B. Altman
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-11 (2021)
Classifying cells into unseen cell types remains challenging in scRNA-seq analysis. Here we show that Cell Ontology enables an accurate classification of unseen cell types through considering the cell type relationships in the Cell Ontology graph.
Externí odkaz:
https://doaj.org/article/1d09fe5933a6428fb050655243e85aa0
Autor:
Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li, Robert C Jones, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li
Publikováno v:
eLife, Vol 10 (2021)
Recognition of environmental cues is essential for the survival of all organisms. Transcriptional changes occur to enable the generation and function of the neural circuits underlying sensory perception. To gain insight into these changes, we generat
Externí odkaz:
https://doaj.org/article/74b6629249ee4630bde8783922a0e4bc
Autor:
Tzu-Chiao Lu, Maria Brbić, Ye-Jin Park, Tyler Jackson, Jiaye Chen, Sai Saroja Kolluru, Yanyan Qi, Nadja Sandra Katheder, Xiaoyu Tracy Cai, Seungjae Lee, Yen- Chung Chen, Niccole Auld, Chung-Yi Liang, Sophia H. Ding, Doug Welsch, Samuel D’Souza, Angela Oliveira Pisco, Robert C. Jones, Jure Leskovec, Eric C. Lai, Hugo J. Bellen, Liqun Luo, Heinrich Jasper, Stephen R. Quake, Hongjie Li
Aging is characterized by a decline in tissue function, but the underlying changes at cellular resolution across the organism remain unclear. Here, we present the Aging Fly Cell Atlas, a single-nucleus transcriptomic map of the whole agingDrosophila.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::af71a9446b3c4735eeefa4f24a01855d
https://doi.org/10.1101/2022.12.06.519355
https://doi.org/10.1101/2022.12.06.519355
Autor:
Maria, Brbić, Kaidi, Cao, John W, Hickey, Yuqi, Tan, Michael P, Snyder, Garry P, Nolan, Jure, Leskovec
Publikováno v:
Nature methods. 19(11)
Accurate cell-type annotation from spatially resolved single cells is crucial to understand functional spatial biology that is the basis of tissue organization. However, current computational methods for annotating spatially resolved single-cell data
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::05f403355a0f2fabb4adb5f20d542790
https://pubmed.ncbi.nlm.nih.gov/36280720
https://pubmed.ncbi.nlm.nih.gov/36280720
Autor:
Darya Task, Chun-Chieh Lin, Alina Vulpe, Ali Afify, Sydney Ballou, Maria Brbic, Philipp Schlegel, Joshua Raji, Gregory SXE Jefferis, Hongjie Li, Karen Menuz, Christopher J Potter
Publikováno v:
eLife, Vol 11 (2022)
Drosophila melanogaster olfactory neurons have long been thought to express only one chemosensory receptor gene family. There are two main olfactory receptor gene families in Drosophila, the odorant receptors (ORs) and the ionotropic receptors (IRs).
Externí odkaz:
https://doaj.org/article/0c1159fa3ed746b6a749cbe43825fcbc
Autor:
Qijing Xie, Maria Brbic, Felix Horns, Sai Saroja Kolluru, Robert C Jones, Jiefu Li, Anay R Reddy, Anthony Xie, Sayeh Kohani, Zhuoran Li, Colleen N McLaughlin, Tongchao Li, Chuanyun Xu, David Vacek, David J Luginbuhl, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li
Publikováno v:
eLife, Vol 10 (2021)
Neurons undergo substantial morphological and functional changes during development to form precise synaptic connections and acquire specific physiological properties. What are the underlying transcriptomic bases? Here, we obtained the single-cell tr
Externí odkaz:
https://doaj.org/article/52b08758320341fd9a60d8b91ca94a08