Improving the extraction of ancient Yersinia pestis genomes from the dental pulp

Autor: Pierre Clavel, Lexane Louis, Clio Der Sarkissian, Catherine Thèves, Claudia Gillet, Lorelei Chauvey, Gaétan Tressières, Stéphanie Schiavinato, Laure Calvière-Tonasso, Norbert Telmon, Benoît Clavel, Richard Jonvel, Stéfan Tzortzis, Laetitia Bouniol, Jean-Marc Fémolant, Jennifer Klunk, Hendrik Poinar, Michel Signoli, Caroline Costedoat, Maria A. Spyrou, Andaine Seguin-Orlando, Ludovic Orlando

Publikováno v: iScience, Vol 26, Iss 5, Pp 106787- (2023)

Summary: Ancient DNA preserved in the dental pulp offers the opportunity to characterize the genome of some of the deadliest pathogens in human history. However, while DNA capture technologies help, focus sequencing efforts, and therefore, reduce exp

Externí odkaz: https://doaj.org/article/a8b6ce246a41414fada8d86fa975b41f

Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes

Autor: Maria A. Spyrou, Marcel Keller, Rezeda I. Tukhbatova, Christiana L. Scheib, Elizabeth A. Nelson, Aida Andrades Valtueña, Gunnar U. Neumann, Don Walker, Amelie Alterauge, Niamh Carty, Craig Cessford, Hermann Fetz, Michaël Gourvennec, Robert Hartle, Michael Henderson, Kristin von Heyking, Sarah A. Inskip, Sacha Kacki, Felix M. Key, Elizabeth L. Knox, Christian Later, Prishita Maheshwari-Aplin, Joris Peters, John E. Robb, Jürgen Schreiber, Toomas Kivisild, Dominique Castex, Sandra Lösch, Michaela Harbeck, Alexander Herbig, Kirsten I. Bos, Johannes Krause

Publikováno v: Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)

The second plague pandemic, caused by Yersinia pestis, started in the 14th century and recurred in Europe until the 18th century. Here, the authors reconstruct ancient Y. pestis genomes from human remains spanning this period, shedding light into the

Externí odkaz: https://doaj.org/article/3862cca408484a71a11606bbdad3d933

Stone Age

Autor: Aida, Andrades Valtueña, Gunnar U, Neumann, Maria A, Spyrou, Lyazzat, Musralina, Franziska, Aron, Arman, Beisenov, Andrey B, Belinskiy, Kirsten I, Bos, Alexandra, Buzhilova, Matthias, Conrad, Leyla B, Djansugurova, Miroslav, Dobeš, Michal, Ernée, Javier, Fernández-Eraso, Bruno, Frohlich, Mirosław, Furmanek, Agata, Hałuszko, Svend, Hansen, Éadaoin, Harney, Alina N, Hiss, Alexander, Hübner, Felix M, Key, Elmira, Khussainova, Egor, Kitov, Alexandra O, Kitova, Corina, Knipper, Denise, Kühnert, Carles, Lalueza-Fox, Judith, Littleton, Ken, Massy, Alissa, Mittnik, José Antonio, Mujika-Alustiza, Iñigo, Olalde, Luka, Papac, Sandra, Penske, Jaroslav, Peška, Ron, Pinhasi, David, Reich, Sabine, Reinhold, Raphaela, Stahl, Harald, Stäuble, Rezeda I, Tukhbatova, Sergey, Vasilyev, Elizaveta, Veselovskaya, Christina, Warinner, Philipp W, Stockhammer, Wolfgang, Haak, Johannes, Krause, Alexander, Herbig

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America. 119(17)

The bacterial pathogen Yersinia pestis gave rise to devastating outbreaks throughout human history, and ancient DNA evidence has shown it afflicted human populations as far back as the Neolithic. Y. pestis genomes recovered from the Eurasian Late Neo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::92f0a0d25ead2013674581f0ea560582
https://pubmed.ncbi.nlm.nih.gov/35580179

A treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15th century Europe

Autor: Alexander Herbig, Cosimo Posth, Ronny Friedrich, Kirsten I. Bos, Žydrūnė Miliauskienė, Maria A. Spyrou, Rimantas Jankauskas, Justina Kozakaitė, Susanna Sabin, Aditya Kumar Lankapalli, Karen Giffin

Publikováno v: 23rd Paleopathology Association European meeting, August 25-29, 2022, Vilnius, Lithuania : abstract book, Vilnius : Vilnius University Press, 2022, p. 41
Scientific Reports
Scientific Reports, Vol 10, Iss 1, Pp 1-13 (2020)
Scientific reports, London : Nature Publishing Group, 2020, vol. 10, art. no. 9499, p. [1-13]

Developments in techniques for identification of pathogen DNA in archaeological samples can expand our resolution of disease detection. Our application of a non-targeted molecular screening tool for the parallel detection of pathogens in historical p

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d9a6b60d9231660b12bb896fbf36e1ee
https://repository.vu.lt/VU:ELABAPDB139500033&prefLang=en_US

The origin and legacy of the Etruscans through a 2000-year archeogenomic time transect

Autor: Martina Lari, Stefania Vai, Alessandro Riga, Johannes Krause, Alessandra Sperduti, Alessandra Modi, Luca Cappuccini, Rita Radzevičiūtė, Kirsten I. Bos, Alexander Peltzer, Stefano Ricci, Åshild J. Vågene, Hannah Frenzel, Guido Alberto Gnecchi-Ruscone, Luca Bondioli, Lorenzo M. Bondioli, Guus Kroonen, Maria Angela Turchetti, Cosimo Posth, Angela Mötsch, Monica Zavattaro, Guido Barbujani, Ivan Martini, Eva Fernández-Domínguez, Kathrin Nägele, David Caramelli, Andrea Zifferero, Valentina Zaro, Francesco Boschin, Maria A. Spyrou, Giulia Capecchi, Adriana Moroni, Elsa Pacciani, Michael McCormick, Elizabeth A. Nelson, Cäcilia Freund, Wolfgang Haak, Henrike O. Heyne

Publikováno v: Science advances, 2021, Vol.7(39) [Peer Reviewed Journal]
Science Advances
Science Advances, 7(39), 1-15. AMER ASSOC ADVANCEMENT SCIENCE
Posth, C, Zaro, V, Spyrou, M A, Vai, S, Gnecchi-Ruscone, G A, Modi, A, Peltzer, A, Mötsch, A, Nägele, K, Vågene, Å J, Nelson, E A, Radzeviciute, R, Freund, C, Bondioli, L M, Cappuccini, L, Frenzel, H, Pacciani, E, Boschin, F, Capecchi, G, Martini, I, Moroni, A, Ricci, S, Sperduti, A, Turchetti, M A, Riga, A, Zavattaro, M, Zifferero, A, Heyne, H O, Fernández-Domínguez, E, Kroonen, G J, McCormick, M, Haak, W, Lari, M, Barbujani, G, Bondioli, L, Bos, K I, Caramelli, D & Krause, J 2021, ' The origin and legacy of the Etruscans through a 2000-year archeogenomic time transect ', Science Advances, vol. 7, no. 39, eabi7673 . https://doi.org/10.1126/sciadv.abi7673

Description
Steppe ancestry among the non–Indo-European–speaking Etruscans challenges previous hypotheses on their recent Anatolian origin.
The origin, development, and legacy of the enigmatic Etruscan civilization from the central regi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::396198f0573be00f7e05027e43b7627f
https://doi.org/10.1126/sciadv.abi7673