Zobrazeno 1 - 10
of 30
pro vyhledávání: '"Margherita Paschini"'
Autor:
Bongjun Kim, Yuanjian Huang, Kyung-Pil Ko, Shengzhe Zhang, Gengyi Zou, Jie Zhang, Moon Jong Kim, Danielle Little, Lisandra Vila Ellis, Margherita Paschini, Sohee Jun, Kwon-Sik Park, Jichao Chen, Carla Kim, Jae-Il Park
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-16 (2024)
Abstract Cell plasticity, changes in cell fate, is crucial for tissue regeneration. In the lung, failure of regeneration leads to diseases, including fibrosis. However, the mechanisms governing alveolar cell plasticity during lung repair remain elusi
Externí odkaz:
https://doaj.org/article/dc073faf3c6b41ac9927b12392b90d9a
Autor:
Haikuo Zhang, Christine Fillmore Brainson, Shohei Koyama, Amanda J. Redig, Ting Chen, Shuai Li, Manav Gupta, Carolina Garcia-de-Alba, Margherita Paschini, Grit S. Herter-Sprie, Gang Lu, Xin Zhang, Bryan P. Marsh, Stephanie J. Tuminello, Chunxiao Xu, Zhao Chen, Xiaoen Wang, Esra A. Akbay, Mei Zheng, Sangeetha Palakurthi, Lynette M. Sholl, Anil K. Rustgi, David J. Kwiatkowski, J Alan Diehl, Adam J. Bass, Norman E. Sharpless, Glenn Dranoff, Peter S. Hammerman, Hongbin Ji, Nabeel Bardeesy, Dieter Saur, Hideo Watanabe, Carla F. Kim, Kwok-Kin Wong
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-15 (2017)
The mechanisms that govern the transdifferentiation of lung adenocarcinomas (ADC) to squamous cell carcinoma (SCC) are not fully understood. Here, the authors show that EZH2 loss exacerbates the transdifferentiation of ADCs to SCCs as a result of chr
Externí odkaz:
https://doaj.org/article/0ce62822a53e4bae828250fb78660d57
Autor:
Haikuo Zhang, Christine Fillmore Brainson, Shohei Koyama, Amanda J. Redig, Ting Chen, Shuai Li, Manav Gupta, Carolina Garcia-de-Alba, Margherita Paschini, Grit S. Herter-Sprie, Gang Lu, Xin Zhang, Bryan P Marsh, Stephanie J. Tuminello, Chunxiao Xu, Zhao Chen, Xiaoen Wang, Esra A. Akbay, Mei Zheng, Sangeetha Palakurthi, Lynette M. Sholl, Anil K. Rustgi, David J. Kwiatkowski, J. Alan Diehl, Adam J. Bass, Norman E. Sharpless, Glenn Dranoff, Peter S. Hammerman, Hongbin Ji, Nabeel Bardeesy, Dieter Saur, Hideo Watanabe, Carla F. Kim, Kwok-Kin Wong
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-1 (2017)
Nature Communications 8: Article number: 14922 (2017); Published 7 April 2017; Updated 9 June 2017 The affiliation details for Hideo Watanabe are incorrect in this Article. The correct affiliation details for this author are given below: Department o
Externí odkaz:
https://doaj.org/article/4e12b4b3cd7948f3862b7e4f3fea9569
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
Figure S1 shows detailed RNA-sequencing analysis of patient samples as well as murine isogenic cell lines. Also presented here is further characterization of human isogenic models of BRG1 loss.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ba123dd21772c1f92dce43113c871efc
https://doi.org/10.1158/0008-5472.22425849
https://doi.org/10.1158/0008-5472.22425849
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
Differential RNA-seq analysis and list of all gene ontology and cancer reactome pathways found for top differentially upregulated genes in BRG1 mutant lung cancer patients compared to BRG1 wildtype patients, in the TCGA, PanCancer databases.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::06e71f348ecd52e0d7c476c872d37492
https://doi.org/10.1158/0008-5472.22425828
https://doi.org/10.1158/0008-5472.22425828
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
All figure legends for supplementary figures included here.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::19b650f31ead1dbbe16ff34a0dd49eb8
https://doi.org/10.1158/0008-5472.22425831
https://doi.org/10.1158/0008-5472.22425831
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
Cancer dependency analysis in pan cancer datasets - DRIVE and ACHILLES.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3b6629d9c4dc99ecf26cbf5a36b3cf1b
https://doi.org/10.1158/0008-5472.22425816.v1
https://doi.org/10.1158/0008-5472.22425816.v1
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
Differential RNA-seq analysis and list of all gene ontology and cancer reactome pathways found for top differentially upregulated genes in isogenic murine Brg1 knockout lung cancer cells compared to Brg1 wildtype cells.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1412ba6cdd4e5c079eb74c3a982704cb
https://doi.org/10.1158/0008-5472.22425825
https://doi.org/10.1158/0008-5472.22425825
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
All titles for supplementary tables included here.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::692c34811ac3ee927e9a7d837c3806df
https://doi.org/10.1158/0008-5472.22425813
https://doi.org/10.1158/0008-5472.22425813
Autor:
Carla F. Kim, Tyler Jacks, Steven A. Carr, Lee Zou, Kwok-Kin Wong, Aaron N. Hata, Alice T. Shaw, Roderick T. Bronson, Angeliki Karatza, Hai Hu, Fei Li, Audris Oh, Chendi Li, D.R. Mani, Monica Schenone, Caroline R. Stanclift, Mary C. Beytagh, Margherita Paschini, Antoine Simoneau, Jonathan Y. Kim, Patrizia Pessina, Francisco J. Sanchez-Rivera, Christine F. Brainson, Arjun Bhutkar, Hasmik Keshishian, Caroline G. Fahey, Carla P. Concepcion, Manav Gupta
Mass spectrometry-based enrichment of proteins quantified using Baf47 interaction in isogenic Brg1 wildtype and knockout cells. List includes details about identification and quantitation of proteins and is sorted by logFC.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b2dc41f28299c63555d703c976977ec
https://doi.org/10.1158/0008-5472.22425819.v1
https://doi.org/10.1158/0008-5472.22425819.v1