Výsledky vyhledávání - "Marek J Piatek"

Akademický článek

Simplified method for predicting a functional class of proteins in transcription factor complexes.

Autor: Marek J Piatek, Michael C Schramm, Dharani D Burra, Abdulaziz Binshbreen, Boris R Jankovic, Rajesh Chowdhary, John A C Archer, Vladimir B Bajic

Publikováno v: PLoS ONE, Vol 8, Iss 7, p e68857 (2013)

BACKGROUND: Initiation of transcription is essential for most of the cellular responses to environmental conditions and for cell and tissue specificity. This process is regulated through numerous proteins, their ligands and mutual interactions, as we

Externí odkaz: https://doaj.org/article/751972262c8c4ac8a56f2976868e26d7

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Akademický článek

Exploration of the Biosynthetic Potential of the Populus Microbiome

Autor: Patricia M. Blair, Miriam L. Land, Marek J. Piatek, Daniel A. Jacobson, Tse-Yuan S. Lu, Mitchel J. Doktycz, Dale A. Pelletier

Publikováno v: mSystems, Vol 3, Iss 5 (2018)

ABSTRACT Natural products (NPs) isolated from bacteria have dramatically advanced human society, especially in medicine and agriculture. The rapidity and ease of genome sequencing have enabled bioinformatics-guided NP discovery and characterization.

Externí odkaz: https://doaj.org/article/67bbb1c720a04215bad3562ce5c97b57

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Akademický článek

Viral Metagenomics: Analysis of Begomoviruses by Illumina High-Throughput Sequencing

Autor: Ali Idris, Mohammed Al-Saleh, Marek J. Piatek, Ibrahim Al-Shahwan, Shahjahan Ali, Judith K. Brown

Publikováno v: Viruses, Vol 6, Iss 3, Pp 1219-1236 (2014)

Traditional DNA sequencing methods are inefficient, lack the ability to discern the least abundant viral sequences, and ineffective for determining the extent of variability in viral populations. Here, populations of single-stranded DNA plant begomov

Externí odkaz: https://doaj.org/article/0e7e0eae77564cbb895760b1b53731fc

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Population genomic response to geographic gradients by widespread and endemic fishes of the Arabian Peninsula

Autor: Tane H. Sinclair-Taylor, Pablo Saenz-Agudelo, Jennifer H. McIlwain, John Howard Choat, Michael L. Berumen, Edgar Fernando Cagua, Marek J. Piatek, Brian W. Bowen, Nigel E. Hussey, Jean-Paul A. Hobbs, Steven T. Kessel, Joseph D. DiBattista, Mark A. Priest, Camrin D. Braun, Luiz A. Rocha, Michelle R. Gaither

Publikováno v: Ecology and Evolution, Vol 10, Iss 10, Pp 4314-4330 (2020)
Ecology and Evolution

Genetic structure within marine species may be driven by local adaptation to their environment, or alternatively by historical processes, such as geographic isolation. The gulfs and seas bordering the Arabian Peninsula offer an ideal setting to exami

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::11dd9f1901d22f59aa0f0b1ed44698c9
https://doaj.org/article/95afbdb50eaf4a55aabedfd624d29d03

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Using a butterflyfish genome as a general tool for RAD-Seq studies in specialized reef fish

Autor: Michael L. Berumen, Manuel Aranda, Xin Wang, Pablo Saenz-Agudelo, Joseph D. DiBattista, Marek J. Piatek

Publikováno v: Molecular Ecology Resources. 17:1330-1341

Data from a large-scale restriction site-associated DNA sequencing (RAD-Seq) study of nine butterflyfish species in the Red Sea and Arabian Sea provided a means to test the utility of a recently published draft genome (Chaetodon austriacus) and asses

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::82d9224ff6d4afb68e9145333fe0b09a
https://doi.org/10.1111/1755-0998.12662

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Comparative phylogeography of reef fishes from the Gulf of Aden to the Arabian Sea reveals two cryptic lineages

Autor: Jean-Paul A. Hobbs, Michelle R. Gaither, Tane H. Sinclair-Taylor, Pablo Saenz-Agudelo, Brian W. Bowen, Mark A. Priest, Michael L. Berumen, Jennifer H. McIlwain, Marek J. Piatek, Luiz A. Rocha, J. Howard Choat, Joseph D. DiBattista

Publikováno v: Coral Reefs. 36:625-638

The Arabian Sea is a heterogeneous region with high coral cover and warm stable conditions at the western end (Djibouti), in contrast to sparse coral cover, cooler temperatures, and upwelling at the eastern end (southern Oman). We tested for barriers

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::590ec89ac7c07fe8a8c1b6485902633e
https://doi.org/10.1007/s00338-017-1548-y

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Draft genome of an iconic Red Sea reef fish, the blacktail butterflyfish (Chaetodon austriacus): current status and its characteristics

Autor: Pablo Saenz-Agudelo, Joseph D. DiBattista, Manuel Aranda, Marek J. Piatek, Michael L. Berumen, Xin Wang

Publikováno v: Molecular Ecology Resources. 18:347-355

Butterflyfish are among the most iconic of the coral reef fishes and represent a model system to study general questions of biogeography, evolution and population genetics. We assembled and annotated the genome sequence of the blacktail butterflyfish

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6482a912be297ad5ab3675252e72aa0c
https://doi.org/10.1111/1755-0998.12588

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Abstract LB-130: Suppression of tumor immune activity in adrenocortical carcinoma with excess glucocorticoid

Autor: Marzena Mura, Mouhammed Amir Habra, Andrew E. Greenstein, Andreas Grauer, Marek J. Piatek, Paweł Biernat, Stacie Peacock Shepherd

Publikováno v: Cancer Research. 80:LB-130

Introduction: Elevated glucocorticoid (GC) activity, while difficult to accurately quantify, has been implicated in the pathophysiology of multiple cancer types. Approximately half of adrenocortical carcinoma (ACC) patients exhibit excess GC (GC+), w

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::4c4bd6aef54fcbdfcc8cc72084052150
https://doi.org/10.1158/1538-7445.am2020-lb-130

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