Position Weight Matrix or Acyclic Probabilistic Finite Automaton: Which model to use? A decision rule inferred for the prediction of transcription factor binding sites

Autor: Guilherme Miura Lavezzo, Marcelo de Souza Lauretto, Luiz Paulo Moura Andrioli, Ariane Machado-Lima

Publikováno v: Genetics and Molecular Biology, Vol 46, Iss 4 (2024)

Abstract Prediction of transcription factor binding sites (TFBS) is an example of application of Bioinformatics where DNA molecules are represented as sequences of A, C, G and T symbols. The most used model in this problem is Position Weight Matrix (

Externí odkaz: https://doaj.org/article/ef02c2ab757b418ab2cfc1ff13d7616a

Algoritmo de Ensemble para Classificação em Fluxo de Dados com Classes Desbalanceadas e Mudanças de Conceito

Autor: Douglas Amorim de Oliveira, Karina Valdivia Delgado, Marcelo de Souza Lauretto

Publikováno v: Anais do XIX Encontro Nacional de Inteligência Artificial e Computacional (ENIAC 2022).

Com o crescimento exponencial na geração de dados observado nas últimas décadas, a realização de tarefas de classificação sobre esses dados apresenta diversos desafios. Estes conjuntos de dados, por vezes, não são balanceadas quanto às sua

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f04bffadd94f8cfad40a03a5cf52bcbb
https://doi.org/10.5753/eniac.2022.227356

Assessment microbial risks for the presence of Cryptosporidium spp . and Giardia spp . based on the surveillance of the water supply systems in Colombia, 2014–2018

Autor: Blanca Lisseth Guzmán Barragán, Marcelo de Souza Lauretto, Maria Tereza Pepe Razzolini, Adelaide Cássia Nardocci, Karen Vanessa Marimón Sibaja

Publikováno v: Water Environment Research. 94

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::7a13284fd2e92d4b705da5ff253663be
https://doi.org/10.1002/wer.10776

Assessment of health risks from recreational exposure to Giardia and Cryptosporidium in coastal bathing waters

Autor: Marcelo de Souza Lauretto, Maria Tereza Pepe Razzolini, Adelaide Cássia Nardocci, Maria Inés J. Navarro Gonzaléz, Karla Cristiane Pinto, Maria Inês Zanoli Sato

Publikováno v: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP

Some Brazilian beaches are impacted by raw or poorly treated sewage. Thus, users (beachgoers, sports people, and children) are exposed to pathogens, which pose health concerns. This study aimed to estimate the probability of infection and disease by

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6041663c9e2e65f1c7e717a741179b45
https://doi.org/10.1007/s11356-020-08650-2

Contributors

Autor: Md. Afjal Ahmad, Ramesh Alluri, Stênio Nunes Alves, Himadri Tanaya Behera, Alok Bharadwaj, Khushbo Bhardwaj, Ashok Bhattacharyya, Sundaresan Bhavaniramya, Rafael Dorighello Cadamuro, Surabhi Chaturvedi, Pulkit Chawla, Mairon Cesar Coimbra, Eduardo José Azevedo Corrêa, Santhosha Dasarapu, Leonardo Henrique França de Lima, Marcelo de Souza Lauretto, Shrestha Debnath, Abhijit Dey, Gislaine Fongaro, Palash Ghorai, Dipankar Ghosh, Sukanya Gogoi, Th Indrama, Sérgio Luiz Alves Júnior, Taraka Sunil Kumar Karumuri, Harpreet Kaur, Sanchita Kulshrestha, Ananth Kurella, V. Mageshwaran, M.K. Mahatama, Doris Sobral Marques Souza, Snehashis Mishra, Mohammad Reza Moosavi, Samapika Nandy, Adelaide Cássia Nardocci, null Neemisha, M. Nikhil Raj, Devendra Kumar Pandey, K. Pandiyan, Joginder Singh Panwar, Prerana Parihar, Amit Paschapur, Jagdish Kumar Patidar, Pravin Prakash, Asha Singh Rajavat, Neeraj Rani, Lopamudra Ray, Maria Tereza Pepe Razzzolini, Paula Rogovski, Vidya Sabbani, Bandana Saikia, Ipsita Samal, Seema Sangwan, Maria Inês Zanoli Sato, Ajit Kumar Savani, Beatriz Pereira Savi, Pankaj Sharma, A.L. Singh, H.B. Singh, Puneet Singh, Purnima Singh, Sushila Singh, Sushmita Singh, A.R.N.S. Subbanna, J.C. Tarafdar, Onkar Nath Tiwari, Helen Treichel, Sneha Tripathi, Champa keya Tudu, Ramar Vanajothi, Vanitha Kondi, I. Venkatesh, Aman Verma, Selvaraju Vishnupriya

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::80c83dd100baadbc36d6320283ed4245
https://doi.org/10.1016/b978-0-323-85579-2.09990-1