Zobrazeno 1 - 10
of 31
pro vyhledávání: '"Makoto K Shimada"'
Autor:
Craig Alan Gough, Keiichi Homma, Yumi Yamaguchi-Kabata, Makoto K Shimada, Ranajit Chakraborty, Yasuyuki Fujii, Hisakazu Iwama, Shinsei Minoshima, Shigetaka Sakamoto, Yoshiharu Sato, Yoshiyuki Suzuki, Masahito Tada-Umezaki, Ken Nishikawa, Tadashi Imanishi, Takashi Gojobori
Publikováno v:
PLoS ONE, Vol 7, Iss 11, p e50445 (2012)
The relationship between sequence polymorphisms and human disease has been studied mostly in terms of effects of single nucleotide polymorphisms (SNPs) leading to single amino acid substitutions that change protein structure and function. However, le
Externí odkaz:
https://doaj.org/article/13bbaccc7fd44c1ebb784e2804b071a7
Autor:
Yumi Yamaguchi-Kabata, Makoto K Shimada, Yosuke Hayakawa, Shinsei Minoshima, Ranajit Chakraborty, Takashi Gojobori, Tadashi Imanishi
Publikováno v:
PLoS ONE, Vol 3, Iss 10, p e3393 (2008)
BACKGROUND: A great amount of data has been accumulated on genetic variations in the human genome, but we still do not know much about how the genetic variations affect gene function. In particular, little is known about the distribution of nonsense
Externí odkaz:
https://doaj.org/article/ddd8dc7791ad4f7f8d8bf1265f2988d2
Autor:
Makoto K. Shimada, Tsunetoshi Nishida
The application of current genome-wide sequencing techniques on human populations helps elucidate the considerable gene flow among genusHomo, which includes modern and archaic humans. Gene flow among current human populations has been studied using f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb8f63654dc9af698a906263bf31d87d
https://doi.org/10.1101/2020.03.28.012914
https://doi.org/10.1101/2020.03.28.012914
Autor:
Makoto K. Shimada, Tsunetoshi Nishida
Publikováno v:
Molecular Phylogenetics and Evolution. 109:409-414
Felsenstein's PHYLIP package of molecular phylogeny tools has been used globally since 1980. The programs are receiving renewed attention because of their character-based user interface, which has the advantage of being scriptable for use with large-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ee35a09343999353678eef01fd58f16b
https://doi.org/10.1016/j.ympev.2017.02.012
https://doi.org/10.1016/j.ympev.2017.02.012
Publikováno v:
International Journal of Molecular Sciences, Vol 16, Iss 5, Pp 10376-10388 (2015)
International Journal of Molecular Sciences
Volume 16
Issue 5
Pages 10376-10388
International Journal of Molecular Sciences
Volume 16
Issue 5
Pages 10376-10388
According to the length distribution of human introns, there is a large population of short introns with a threshold of 65 nucleotides (nt) and a peak at 85 nt. Using human genome and transcriptome databases, we investigated the introns shorter than
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9ddd84900943f2abe5f3c41e049ee34b
http://www.mdpi.com/1422-0067/16/5/10376
http://www.mdpi.com/1422-0067/16/5/10376
Publikováno v:
The Journal of Animal Genetics. 45:71-72
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f02374fcbb28065c985ca74825774b44
https://doi.org/10.5924/abgri.45.71
https://doi.org/10.5924/abgri.45.71
Publikováno v:
Folia Primatologica. 80:19-32
Maternal kinship is important in primate societies because it affects individual behaviour as well as the sustainability of populations. All members of the Bossou chimpanzee community are descended from 8 individuals (herein referred to as original a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9c574142cd799bb8fc1b184b1d60a945
https://doi.org/10.1159/000181187
https://doi.org/10.1159/000181187
Autor:
Ranajit Chakraborty, Tadashi Imanishi, Makoto K. Shimada, Chisato Yamasaki, Yoshiyuki Suzuki, Yumi Yamaguchi-Kabata, Takashi Gojobori, Ryoko Sanbonmatsu
Publikováno v:
Molecular genetics and genomics : MGG. 291(5)
Short Tandem Repeats (STRs) comprise repeats of one to several base pairs. Because of the high mutability due to strand slippage during DNA synthesis, rapid evolutionary change in the number of repeating units directly shapes the range of repeat-numb
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e9b974ff1b3d720ac7edd6ef9eb8d3f
https://pubmed.ncbi.nlm.nih.gov/27290643
https://pubmed.ncbi.nlm.nih.gov/27290643
Publikováno v:
Molecular Biology and Evolution. 24:687-698
The population genetic history of a 10.1-kbp noncoding region of the human X chromosome was studied using the males of the HGDP-CEPH Human Genome Diversity Panel (672 individuals from 52 populations). The geographic distribution of patterns of variat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5932ce1de9b01935326fc005fe2e525e
https://doi.org/10.1093/molbev/msl196
https://doi.org/10.1093/molbev/msl196
Publikováno v:
Cytogenetic and Genome Research. 108:83-90
Chromosome rearrangement has been considered to be important in the evolutionary process. Here, we demonstrate the evolutionary relationship of the rearranged human chromosome 12 and the corresponding chromosome XII in apes (chimpanzee, bonobo, goril
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::29ff9a67c21dcb6e101639ca583f771f
https://doi.org/10.1159/000080805
https://doi.org/10.1159/000080805