Long noncoding RNA plasmacytoma variant translocation 1 is overexpressed in cutaneous squamous cell carcinoma and exon 2 is critical for its oncogenicity.

Autor: Li, Chen, Sun, Chengxi, Mahapatra, Kunal Das, Riihilä, Pilvi, Knuutila, Jaakko, Nissinen, Liisa, Lapins, Jan, Kähäri, Veli-Matti, Homey, Bernhard, Sonkoly, Enikö, Pivarcsi, Andor

Publikováno v: British Journal of Dermatology; Mar2024, Vol. 190 Issue 3, p415-426, 12p

Chromatin interactions in differentiating keratinocytes reveal novel atopic dermatitis– and psoriasis-associated genes.

Autor: Sahlén, Pelin, Spalinskas, Rapolas, Asad, Samina, Mahapatra, Kunal Das, Höjer, Pontus, Anil, Anandashankar, Eisfeldt, Jesper, Srivastava, Ankit, Nikamo, Pernilla, Mukherjee, Anaya, Kim, Kyu-Han, Bergman, Otto, Ståhle, Mona, Sonkoly, Enikö, Pivarcsi, Andor, Wahlgren, Carl-Fredrik, Nordenskjöld, Magnus, Taylan, Fulya, Bradley, Maria, Tapia-Páez, Isabel

Publikováno v: Journal of Allergy & Clinical Immunology; May2021, Vol. 147 Issue 5, p1742-1752, 11p

Alterations of miRNAs and miRNA-regulated mRNA expression in GC B cell lymphomas determined by integrative sequencing analysis

Autor: Hezaveh, Kebria, Kloetgen, Andreas, Bernhart, Stephan H, Mahapatra, Kunal Das, Lenze, Dido, Richter, Julia, Haake, Andrea, Bergmann, Anke K, Brors, Benedikt, Burkhardt, Birgit, Claviez, Alexander, Drexler, Hans G, Eils, Roland, Haas, Siegfried, Hoffmann, Steve, Karsch, Dennis, Klapper, Wolfram, Kleinheinz, Kortine, Korbel, Jan, Kretzmer, Helene, Kreuz, Markus, Küppers, Ralf, Lawerenz, Chris, Leich, Ellen, Loeffler, Markus, Mantovani-Loeffler, Luisa, López, Cristina, McHardy, Alice C, Möller, Peter, Rohde, Marius, Rosenstiel, Philip, Rosenwald, Andreas, Schilhabel, Markus, Schlesner, Matthias, Scholz, Ingrid, Stadler, Peter F, Stilgenbauer, Stephan, Sungalee, Séphanie, Szczepanowski, Monika, Trümper, Lorenz, Weniger, Marc A, Siebert, Reiner, Borkhardt, Arndt, Hummel, Michael, Hoell, Jessica I

MicroRNAs are well-established players in posttranscriptional gene regulation. However, information on the effects of microRNA deregulation mainly relies on bioinformatic prediction of potential targets, whereas proof of the direct physical microRNAs

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______1146::2d3d8f497ef54686bcccd272db7d3810
https://hdl.handle.net/10033/617314

Alterations of microRNA and microRNA-regulated messenger RNA expression in germinal center B-cell lymphomas determined by integrative sequencing analysis.

Autor: Hezaveh K; Department of Pediatric Oncology, Hematology and Clinical Immunology, Heinrich-Heine-University, Medical Faculty, Düsseldorf, Germany., Kloetgen A; Department of Pediatric Oncology, Hematology and Clinical Immunology, Heinrich-Heine-University, Medical Faculty, Düsseldorf, Germany.; Department of Algorithmic Bioinformatics, Heinrich-Heine University, Duesseldorf, Germany., Bernhart SH; Transcriptome Bioinformatics Group, LIFE Research Center for Civilization Diseases, University of Leipzig, Germany.; Bioinformatics Group, Department of Computer Science, University of Leipzig, Germany.; Interdisciplinary Center for Bioinformatics, University of Leipzig, Germany., Mahapatra KD; Department of Pediatric Oncology, Hematology and Clinical Immunology, Heinrich-Heine-University, Medical Faculty, Düsseldorf, Germany., Lenze D; Institute of Pathology, Charité - University Medicine Berlin, Germany., Richter J; Institute of Human Genetics, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Haake A; Institute of Human Genetics, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Bergmann AK; Institute of Human Genetics, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Brors B; Division Applied Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany.; National Center for Tumor Diseases (NCT), Heidelberg, Germany.; German Cancer Consortium (DKTK), Heidelberg, Germany., Burkhardt B; Department of Pediatric Hematology and Oncology, University Hospital Münster, Germany., Claviez A; Department of Pediatrics, University Hospital Schleswig-Holstein, Campus Kiel, Germany., Drexler HG; Department of Human and Animal Cell Cultures, German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany., Eils R; Division of Theoretical Bioinformatics (B080), German Cancer Research Center (DKFZ), Heidelberg, Germany.; Department of Bioinformatics and Functional Genomics, Institute for Pharmacy and Molecular Biotechnology and Bioquant, Heidelberg University, Germany., Haas S; Friedrich-Ebert Hospital Neumünster, Clinics for Hematology, Oncology and Nephrology, Neumünster, Germany., Hoffmann S; Transcriptome Bioinformatics Group, LIFE Research Center for Civilization Diseases, University of Leipzig, Germany.; Bioinformatics Group, Department of Computer Science, University of Leipzig, Germany., Karsch D; Department of Internal Medicine II: Hematology and Oncology, University Medical Centre, Campus Kiel, Germany., Klapper W; Hematopathology Section, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Kleinheinz K; Division of Theoretical Bioinformatics (B080), German Cancer Research Center (DKFZ), Heidelberg, Germany., Korbel J; EMBL Heidelberg, Genome Biology, Heidelberg, Germany., Kretzmer H; Transcriptome Bioinformatics Group, LIFE Research Center for Civilization Diseases, University of Leipzig, Germany.; Bioinformatics Group, Department of Computer Science, University of Leipzig, Germany., Kreuz M; Institute for Medical Informatics Statistics and Epidemiology, Leipzig, Germany., Küppers R; Institute of Cell Biology (Cancer Research), University of Duisburg-Essen, Essen, Germany., Lawerenz C; Division of Theoretical Bioinformatics (B080), German Cancer Research Center (DKFZ), Heidelberg, Germany., Leich E; Institute of Pathology, University of Würzburg, and Comprehensive Cancer Center Mainfranken, Würzburg, Germany., Loeffler M; Institute for Medical Informatics Statistics and Epidemiology, Leipzig, Germany., Mantovani-Loeffler L; Hospital of Internal Medicine II, Hematology and Oncology, St-Georg Hospital Leipzig, Germany., López C; Institute of Human Genetics, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., McHardy AC; Department of Algorithmic Bioinformatics, Heinrich-Heine University, Duesseldorf, Germany.; Computational Biology of Infection Research, Helmholtz Center for Infection Research, Braunschweig, Germany., Möller P; Institute of Pathology, Medical Faculty of the Ulm University, Germany., Rohde M; Department of Pediatric Hematology and Oncology University Hospital Giessen, Germany., Rosenstiel P; Institute of Clinical Molecular Biology, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Rosenwald A; Institute of Pathology, University of Würzburg, and Comprehensive Cancer Center Mainfranken, Würzburg, Germany., Schilhabel M; Institute of Clinical Molecular Biology, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Schlesner M; Division of Theoretical Bioinformatics (B080), German Cancer Research Center (DKFZ), Heidelberg, Germany., Scholz I; Division of Theoretical Bioinformatics (B080), German Cancer Research Center (DKFZ), Heidelberg, Germany., Stadler PF; Transcriptome Bioinformatics Group, LIFE Research Center for Civilization Diseases, University of Leipzig, Germany.; Bioinformatics Group, Department of Computer Science, University of Leipzig, Germany.; Interdisciplinary Center for Bioinformatics, University of Leipzig, Germany.; RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology IZI, Leipzig, Germany.; Max-Planck-Institute for Mathematics in Sciences, Leipzig, Germany.; Santa Fe Institute, NM, USA., Stilgenbauer S; Department of Internal Medicine III, University of Ulm, Germany., Sungalee S; EMBL Heidelberg, Genome Biology, Heidelberg, Germany., Szczepanowski M; Hematopathology Section, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Trümper L; Department of Hematology and Oncology, Georg-August-University of Göttingen, Germany., Weniger MA; Institute of Cell Biology (Cancer Research), University of Duisburg-Essen, Essen, Germany., Siebert R; Institute of Human Genetics, University Hospital Schleswig-Holstein Campus Kiel/Christian-Albrechts University Kiel, Germany., Borkhardt A; Department of Pediatric Oncology, Hematology and Clinical Immunology, Heinrich-Heine-University, Medical Faculty, Düsseldorf, Germany., Hummel M; Institute of Pathology, Charité - University Medicine Berlin, Germany., Hoell JI

Publikováno v: Haematologica [Haematologica] 2016 Nov; Vol. 101 (11), pp. 1380-1389. Date of Electronic Publication: 2016 Jul 06.