Zobrazeno 1 - 10
of 205
pro vyhledávání: '"Magnus, Nordborg"'
Autor:
Raul de la Mata, Almudena Mollá-Morales, Belén Méndez-Vigo, Rafael Torres-Pérez, Juan Carlos Oliveros, Rocío Gómez, Arnald Marcer, Antonio R. Castilla, Magnus Nordborg, Carlos Alonso-Blanco, F. Xavier Picó
Publikováno v:
BMC Ecology and Evolution, Vol 24, Iss 1, Pp 1-18 (2024)
Abstract Background Despite its implications for population dynamics and evolution, the relationship between genetic and phenotypic variation in wild populations remains unclear. Here, we estimated variation and plasticity in life-history traits and
Externí odkaz:
https://doaj.org/article/b43469b09b174d5aadbb9b60a4ba516f
Autor:
Anamarija Butkovic, Thomas James Ellis, Ruben Gonzalez, Benjamin Jaegle, Magnus Nordborg, Santiago F Elena
Publikováno v:
eLife, Vol 12 (2024)
Plant viruses account for enormous agricultural losses worldwide, and the most effective way to combat them is to identify genetic material conferring plant resistance to these pathogens. Aiming to identify genetic associations with responses to infe
Externí odkaz:
https://doaj.org/article/8f3de75485744d67a49d981f5b01a628
Autor:
Benjamin Jaegle, Rahul Pisupati, Luz Mayela Soto-Jiménez, Robin Burns, Fernando A. Rabanal, Magnus Nordborg
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-19 (2023)
Abstract Background It is apparent that genomes harbor much structural variation that is largely undetected for technical reasons. Such variation can cause artifacts when short-read sequencing data are mapped to a reference genome. Spurious SNPs may
Externí odkaz:
https://doaj.org/article/b0efb04d114a4efd8ce0c13e14749b02
Publikováno v:
PLoS Genetics, Vol 19, Iss 5, p e1010728 (2023)
Gene-body methylation (gbM) refers to sparse CG methylation of coding regions, which is especially prominent in evolutionarily conserved house-keeping genes. It is found in both plants and animals, but is directly and stably (epigenetically) inherite
Externí odkaz:
https://doaj.org/article/592ddc960b27450b856ebe49b144bcd2
Publikováno v:
PLoS Genetics, Vol 18, Iss 9, p e1010345 (2022)
Genome-wide association studies (GWAS) have revealed that the striking natural variation for DNA CHH-methylation (mCHH; H is A, T, or C) of transposons has oligogenic architecture involving major alleles at a handful of known methylation regulators.
Externí odkaz:
https://doaj.org/article/86fce17a2ec444d3925220e59e86c836
Autor:
Pieter Clauw, Envel Kerdaffrec, Joanna Gunis, Ilka Reichardt-Gomez, Viktoria Nizhynska, Stefanie Koemeda, Jakub Jez, Magnus Nordborg
Publikováno v:
eLife, Vol 11 (2022)
We investigated early vegetative growth of natural Arabidopsis thaliana accessions in cold, nonfreezing temperatures, similar to temperatures these plants naturally encounter in fall at northern latitudes. We found that accessions from northern latit
Externí odkaz:
https://doaj.org/article/0880fd47080d44d1bbc8b2d17cb221a1
Autor:
Takashi Tsuchimatsu, Hiroyuki Kakui, Misako Yamazaki, Cindy Marona, Hiroki Tsutsui, Afif Hedhly, Dazhe Meng, Yutaka Sato, Thomas Städler, Ueli Grossniklaus, Masahiro M. Kanaoka, Michael Lenhard, Magnus Nordborg, Kentaro K. Shimizu
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-9 (2020)
Reduction of pollen grain number is widespread in selfing plants, but the determining gene is unknown. Here, the authors show that a ribosome-biogenesis factor encoding gene RDP1 is responsible for adaptive reduction of male gamete number in Arabidop
Externí odkaz:
https://doaj.org/article/3051f9d43380413d9d4d6937537a411f
Autor:
Gökçe Aköz, Magnus Nordborg
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-12 (2019)
Abstract Background Whole-genome duplications (WGDs) have dominated the evolutionary history of plants. One consequence of WGD is a dramatic restructuring of the genome as it undergoes diploidization, a process under which deletions and rearrangement
Externí odkaz:
https://doaj.org/article/0ba6bbc9537b492291ccf0c56a722877
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 8, Iss 9, Pp 3059-3068 (2018)
Intermediate phenotypes such as gene expression values can be used to elucidate the mechanisms by which genetic variation causes phenotypic variation, but jointly analyzing such heterogeneous data are far from trivial. Here we extend a so-called medi
Externí odkaz:
https://doaj.org/article/73f5802ee81f4f82ba36c20000d43f81
Publikováno v:
PLoS Genetics, Vol 15, Iss 12, p e1008492 (2019)
DNA cytosine methylation is an epigenetic mark associated with silencing of transposable elements (TEs) and heterochromatin formation. In plants, it occurs in three sequence contexts: CG, CHG, and CHH (where H is A, T, or C). The latter does not allo
Externí odkaz:
https://doaj.org/article/e05271a0e43c4402869d7750697fbc03