Výsledky vyhledávání - "Magali Rompais"

Akademický článek

Streptomyces cocklensis DSM 42063 and Actinacidiphila bryophytorum DSM 42138 Colonize Arabidopsis thaliana and Modulate Its Proteome

Autor: Florence Arsène-Ploetze, Magali Rompais, Abdelmalek Alioua, Valérie Cognat, Mathieu Erhardt, Stefanie Graindorge, Sandrine Koechler, Jérôme Mutterer, Christine Carapito, Hubert Schaller

Publikováno v: PhytoFrontiers, Vol 4, Iss 2, Pp 126-140 (2024)

Streptomycetaceae are found ubiquitously within plant microbiota. Several species belonging to this family are plant growth-promoting bacteria or may inhibit phytopathogens. Such bacteria therefore exert crucial functions in host development and resi

Externí odkaz: https://doaj.org/article/b04da01192214ea199ed658ed34f5de9

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Akademický článek

ProMetIS, deep phenotyping of mouse models by combined proteomics and metabolomics analysis

Publikováno v: Scientific Data, Vol 8, Iss 1, Pp 1-14 (2021)

Measurement(s) preclinical phenotype • protein expression profiling • metabolite profiling Technology Type(s) phenotyping tests • mass spectrometry assay Factor Type(s) genotype • sex Sample Characteristic - Organism Mus musculus Machine-acce

Externí odkaz: https://doaj.org/article/38b5e44d0141472391333021e305577b

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Abstract 697: Extracellular vesicles (EV) - mediators of therapeutic vaccination? In vivo and in vitro characterization of EVs generated after infection of human and murine cells with therapeutic poxviruses

Autor: Lucas Walther, Caroline Tosch, Jules Deforges, Christine Carapito, Magali Rompais, Marie-Christine Claudepierre, Nathalie Silvestre, Kaïdre Bendjama, Eric Quemeneur, Jacky Goetz, Vincent Hyenne, Karola Rittner

Publikováno v: Cancer Research. 83:697-697

Virus-based therapies show promise in inducing systemic anti-tumor immunity. Over the past years, modified poxviruses were developed to induce a sustained antitumoral immune response. Several studies confirm this hypothesis and report induction of T

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::4e10a2154fee5ec2aecf7e6b5565cb8b
https://doi.org/10.1158/1538-7445.am2023-697

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A Combined N-terminomics and Shotgun Proteomics Approach to Investigate the Responses of Human Cells to Rapamycin and Zinc at the Mitochondrial Level

Autor: Sarah Cianférani, Charlotte Macron, Sebastian Alvaro Vaca-Jacome, Catherine Aude-Garcia, Christine Carapito, Joanna Bons, Magali Rompais, Thierry Rabilloud

Publikováno v: Molecular and Cellular Proteomics
Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2019, 18 (6), pp.1085-1095. ⟨10.1074/mcp.RA118.001269⟩
Molecular and Cellular Proteomics, 2019, 18 (6), pp.1085-1095. ⟨10.1074/mcp.RA118.001269⟩
Mol Cell Proteomics

International audience; All but thirteen mammalian mitochondrial proteins are encoded by the nuclear genome, translated in the cytosol and then imported into the mitochondria. For a significant proportion of the mitochondrial proteins, import is coup

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fd0fc04c60e43343b2dff6cbbc77f676
https://doi.org/10.1074/mcp.ra118.001269

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Mapping rRNA 2’-O-methylations and identification of C/D snoRNAs in Arabidopsis thaliana plants

Autor: Yuri Motorin, Christine Carapito, Julio Sáez-Vásquez, Charlotte Montacié, Edouard Jobet, Lilia Ayadi, Virginie Marchand, Christine Gaspin, Magali Rompais, Jacinthe Azevedo-Favory

Publikováno v: RNA Biology
RNA Biology, Taylor & Francis, 2021, pp.1-18. ⟨10.1080/15476286.2020.1869892⟩
RNA Biology, Taylor & Francis, 2021, 18, pp.1760-1777. ⟨10.1080/15476286.2020.1869892⟩
RNA Biology, 2021, 18 (11), pp.1-18. ⟨10.1080/15476286.2020.1869892⟩
article-version (VoR) Version of Record
RNA Biology, Taylor & Francis, 2021, 18 (11), pp.1760-1777. ⟨10.1080/15476286.2020.1869892⟩

International audience; In all eukaryotic cells, the most abundant modification of ribosomal RNA (rRNA) is methylation at the ribose moiety (2ʹ-O-methylation). Ribose methylation at specific rRNA sites is guided by small nucleolar RNAs (snoRNAs) of

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::87badd292b6a1931c9092f5f189039c2
https://hal.archives-ouvertes.fr/hal-03200349

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Proline: an efficient and user-friendly software suite for large-scale proteomics

Autor: Andrea Kalaitzakis, Charlotte Macron, Jean-Philippe Menetrey, David Bouyssié, Anne-Marie Hesse, Sarah Cianférani, Christophe Bruley, Christine Carapito, Magali Rompais, Emmanuelle Mouton-Barbosa, Alexandre Burel, Julie Poisat, Aymen Romdhani, Véronique Dupierris, Jérôme Garin, Anne Gonzalez de Peredo, Yohann Couté, Odile Burlet-Schiltz

Publikováno v: Bioinformatics
Bioinformatics, 2020, 36 (10), pp.3148-3155. ⟨10.1093/bioinformatics/btaa118⟩
Bioinformatics, Oxford University Press (OUP), 2020, 36 (10), pp.3148-3155. ⟨10.1093/bioinformatics/btaa118⟩

Motivation The proteomics field requires the production and publication of reliable mass spectrometry-based identification and quantification results. Although many tools or algorithms exist, very few consider the importance of combining, in a unique

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::976f639cc6b39bbf0dc78b59cde88798
https://hal.science/hal-02551168

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Data-Independent Acquisition Coupled to Visible Laser-Induced Dissociation at 473 nm (DIA-LID) for Peptide-Centric Specific Analysis of Cysteine-Containing Peptide Subset

Autor: Philippe Dugourd, Lény Garcia, Jérôme Lemoine, Magali Rompais, Marion Girod, Christine Carapito

Publikováno v: Analytical Chemistry
Analytical Chemistry, American Chemical Society, 2018, 90 (6), pp.3928-3935. ⟨10.1021/acs.analchem.7b04821⟩

The authors would like to thank Diane Cala and Ruth Rimokh for providing the Escherichia coli and human HS578T cells, as well as Joelle Saulnier for her assistance in protein concentration measurements.; International audience; Thanks to comprehensiv

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09bc9a6451c66f50b3a691e6e8682885
https://hal.archives-ouvertes.fr/hal-01767310

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N-terminome analysis of the human mitochondrial proteome

Autor: Daniel Ayoub, Lydie Lane, Magali Rompais, Amos Marc Bairoch, Christine Carapito, Thierry Rabilloud, Christine Schaeffer-Reiss, Alvaro Sebastian Vaca Jacome, Alain Van Dorsselaer

Publikováno v: Proteomics
Proteomics, 2015, 15 (14 SI), pp.2519-2524. ⟨10.1002/pmic.201400617⟩
Proteomics, Wiley-VCH Verlag, 2015, 15 (14 SI), pp.2519-2524. ⟨10.1002/pmic.201400617⟩
Proteomics, Vol. 15, No 14 (2015) pp. 2519-24

International audience; The high throughput characterization of protein N-termini is becoming an emerging challenge in the proteomics and proteogenomics fields. The present study describes the free N-terminome analysis of human mitochondria-enriched

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98bcc3b1a37bd54b0605ac330a7949a8
https://doi.org/10.1002/pmic.201400617

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Doublet N-Terminal Oriented Proteomics for N-Terminomics and Proteolytic Processing Identification

Autor: Benoit, Westermann, Alvaro Sebastian Vaca, Jacome, Magali, Rompais, Christine, Carapito, Christine, Schaeffer-Reiss

Publikováno v: Methods in molecular biology (Clifton, N.J.). 1574

The study of the N-terminome and the precise identification of proteolytic processing events are key in biology. Dedicated methodologies have been developed as the comprehensive characterization of the N-terminome can hardly be achieved by standard p

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::abf2e650e598b0c947eff841e9a6a5b4
https://pubmed.ncbi.nlm.nih.gov/28315244

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Two proteomic methodologies for defining N-termini of mature human mitochondrial aminoacyl-tRNA synthetases

Autor: Christine Carapito, Marie Sissler, Loukmane Karim, Hagen Schwenzer, Lauriane Kuhn, Magali Rompais, Thierry Rabilloud

Publikováno v: Methods
Methods, Elsevier, 2017, 113, pp.111-119. ⟨10.1016/j.ymeth.2016.10.012⟩
Methods, 2017, 113, pp.111-119. ⟨10.1016/j.ymeth.2016.10.012⟩

International audience; Human mitochondrial aminoacyl-tRNA synthetases (mt-aaRSs) are encoded in the nucleus, synthesized in the cytosol and targeted for importation into mitochondria by a N-terminal mitochondrial targeting sequence. This targeting s

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ab0dc06ce59e11c93cbb9cc6c41d2ea
https://hal.archives-ouvertes.fr/hal-01443719

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