Zobrazeno 1 - 10
of 259
pro vyhledávání: '"MIT License"'
Publikováno v:
IEEE Transactions on Intelligent Transportation Systems. 23:8805-8822
Driving requires the ability to handle unpredictable situations. Since it is not always possible to predict an impending danger, a good driver should preventively assess whether a situation has risks and adopt a safe behavior. Considering, in particu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f55067b55ca9087482446b8d4f2212e
https://doi.org/10.1109/tits.2021.3086397
https://doi.org/10.1109/tits.2021.3086397
Publikováno v:
Journal of proteome research
The volume of proteomics and mass spectrometry data available in public repositories continues to grow at a rapid pace as more researchers embrace open science practices. Open access to the data behind scientific discoveries has become critical to va
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1488032c2e584c3bae64dbeb0d8d6f2d
https://doi.org/10.1021/acs.jproteome.1c00454
https://doi.org/10.1021/acs.jproteome.1c00454
Autor:
Rob Smith, Christopher Burgoyne
Publikováno v:
Journal of Proteome Research. 20:4068-4074
Glycans play an important role in many biochemical processes, including protein function and cell signaling. Mass spectrometry (MS) provides the potential for high-throughput, high-sensitivity analysis of glycans but relies heavily on computational i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6165b61652f48bf7ca80781dfc1deb1
https://doi.org/10.1021/acs.jproteome.1c00379
https://doi.org/10.1021/acs.jproteome.1c00379
Autor:
Alvin Chon, Xiaoqiu Huang
Publikováno v:
International Journal on Bioinformatics & Biosciences. 11:01-07
Short Read Alignment Mapping Metrics (SRAMM): is an efficient and versatile command line tool providing additional short read mapping metrics, filtering, and graphs. Short read aligners report MAPing Quality (MAPQ), but these methods generally are ne
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5ff236080bc63ac8cd2217573695aa41
https://doi.org/10.5121/ijbb.2021.11201
https://doi.org/10.5121/ijbb.2021.11201
Publikováno v:
ACS Measurement Science Au, Vol 1, Iss 1, Pp 11-19 (2021)
Fast-scan cyclic voltammetry at carbon fiber microelectrodes measures low concentrations of analytes in biological systems. There are ongoing efforts to simplify FSCV analysis and several custom platforms are available for filtering and multi-modal a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce3379060d04983a5d2c44fbfa7c11ef
https://doaj.org/article/c3478b73b88f41e1886b661e8b9526ac
https://doaj.org/article/c3478b73b88f41e1886b661e8b9526ac
Publikováno v:
Journal of Chemical Information and Modeling
Shave, S, Chen, Y-K, Pham, N T & Auer, M 2021, ' PyBindingCurve, simulation, and curve fitting to complex binding systems at equilibrium ', Journal of Chemical Information and Modeling . https://doi.org/10.1021/acs.jcim.1c00216
Shave, S, Chen, Y-K, Pham, N T & Auer, M 2021, ' PyBindingCurve, simulation, and curve fitting to complex binding systems at equilibrium ', Journal of Chemical Information and Modeling . https://doi.org/10.1021/acs.jcim.1c00216
Understanding multicomponent binding interactions in protein-ligand, protein-protein and competition systems is essential for fundamental biology and drug discovery. Hand deriving equations quickly becomes unfeasible when the number of components is
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5b7dc4de50da6fa8e02267e76baa98b
http://europepmc.org/articles/PMC8243321
http://europepmc.org/articles/PMC8243321
Publikováno v:
Journal of Statistical Computation and Simulation. 91:2289-2306
The package implements nonparametric (smooth) regression for spherical data in , and is freely available from the Comprehensive Archive Network (CRAN), licensed under the MIT License. It can be use...
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::270b7e0422e32c02b10b3fecd4e74acc
https://doi.org/10.1080/00949655.2021.1890735
https://doi.org/10.1080/00949655.2021.1890735
Publikováno v:
Bioinformatics
Bioinformatics, 2021, 37 (23), pp.4556-4558. ⟨10.1093/bioinformatics/btab688⟩
Bioinformatics, Oxford University Press (OUP), 2021, ⟨10.1093/bioinformatics/btab688⟩
Bioinformatics, 2021, 37 (23), pp.4556-4558. ⟨10.1093/bioinformatics/btab688⟩
Bioinformatics, Oxford University Press (OUP), 2021, ⟨10.1093/bioinformatics/btab688⟩
Motivation Pangenomics evolved since its first applications on bacteria, extending from the study of genes for a given population to the study of all of its sequences available. While multiple methods are being developed to construct pangenomes in eu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2d6229a5b096e773c4d4a0a2ce0b63f7
http://europepmc.org/articles/PMC8652104
http://europepmc.org/articles/PMC8652104
Autor:
Dayna C. Goltz, Jacob L. Steenwyk, Thomas J. Buida, Jonathan E. Schmitz, Christina M. Chavez, Yuanning Li, Grace H. Morales, Abigail L. LaBella, Matthew E. Mead, Maria Hadjifrangiskou, Antonis Rokas, Carla Goncalves
Publikováno v:
Genetics
Bioinformatic analysis—such as genome assembly quality assessment, alignment summary statistics, relative synonymous codon usage, paired-end aware quality trimming and filtering of sequencing reads, file format conversion, and processing and analys
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1bb62e52a14331f9696c1b90f6e78efd
https://europepmc.org/articles/PMC9252278/
https://europepmc.org/articles/PMC9252278/
Autor:
Dave Bouvier, Simon Gladman, Jennifer Hillman-Jackson, Nicola Soranzo, Peter van Heusden, Daniel Fornika, Hans-Rudolf Hotz, Jayadev Joshi, Bradley W. Langhorst, Nathan C. Sheffield, Sergey Golitsynskiy, Frederik Coppens, Gianmauro Cuccuru, David Anderson de Lima Morais, Helena Rasche, Daniel Blankenberg, Björn Grüning, Michał Stolarczyk, Ignacio Eguinoa, Alex Patak, Mauro Petrillo, Nagampalli Vijaykrishna, Michel Barrette, Matthias Bernt, Nate Coraor, Marius van den Beek, Antonio Puertas-Gallardo
Publikováno v:
BIOINFORMATICS ADVANCES
Bioinformatics Advances, 2(1):vbac030
Bioinformatics Advances, 2(1):vbac030
SummaryProperly and effectively managing reference datasets is an important task for many bioinformatics analyses. Refgenie is a reference asset management system that allows to easily organize, retrieve, and share such datasets. Here, we describe th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d96be6bb062a6f081776ffe0b52d40f7
https://pure.eur.nl/en/publications/90eddbf6-6013-459e-982a-38b7a33e1c8e
https://pure.eur.nl/en/publications/90eddbf6-6013-459e-982a-38b7a33e1c8e