Integration of genomic sequencing into the response to the Ebola virus outbreak in Nord Kivu, Democratic Republic of the Congo

Autor: Francois Edidi-Atani, Moussa Moïse Diagne, Meris Matondo-Kuamfumu, Junior Bulabula, Kristian G. Andersen, Bibiche Nsunda, Eric Delaporte, Bailey White, Amadou A. Sall, Trevor Bedford, Matthias Pauthner, Martine Peeters, Nella Bisento, Jean Jacques Muyembe Tamfum, Marceline Akonga, James Hadfield, Daniel Mukadi, Michael R. Wiley, Gustavo Palacios, Fabrice Mambu-Mbika, Amuri Aziza, Nicholas Di Paola, Steve Ahuka-Mundeke, Eddy Kinganda-Lusamaki, Catherine Pratt, Ousmane Faye, Martin Faye, Allison Black, Placide Mbala-Kingebeni

Publikováno v: Nat Med
Nature Medicine
Nature Medicine, 2021, 27 (4), pp.710-716. ⟨10.1038/s41591-021-01302-z⟩

On 1 August 2018, the Democratic Republic of the Congo (DRC) declared its tenth Ebola virus disease (EVD) outbreak. To aid the epidemiologic response, the Institut National de Recherche Biomedicale (INRB) implemented an end-to-end genomic surveillanc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::227ccff0ce444d0fb27dd297b6dc0920
https://doi.org/10.1038/s41591-021-01302-z

Pigmentiphaga humi sp. nov., isolated from soil amended with humic acid

Autor: Alexis Criscuolo, Stefanie P. Glaeser, Hans-Jürgen Busse, Chantal Bizet, Peter Kämpfer, Dominique Clermont, John A. McInroy

Publikováno v: International Journal of Systematic and Evolutionary Microbiology
International Journal of Systematic and Evolutionary Microbiology, 2019, 69 (6), pp.1573-1578. ⟨10.1099/ijsem.0.003355⟩
International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2019, 69 (6), pp.1573-1578. ⟨10.1099/ijsem.0.003355⟩

International audience; A slightly beige-pigmented, Gram-stain-negative, rod-shaped bacterium, strain IMT-318T, was isolated from soil in a field located in Malvern, Alabama, USA. Phylogenetic analysis based on the 16S rRNA gene placed the strain wit

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c3d821f10b182825a24e3443c7b70bb
https://doi.org/10.1099/ijsem.0.003355

Sustained Low-Level Transmission of Zika and Chikungunya Viruses after Emergence in the Fiji Islands

Autor: Jessica Vanhomwegen, Taina Naivalu, Teheipuaura Mariteragi-Helle, Colleen L. Lau, John Aaskov, Jean-Claude Manuguerra, Maite Aubry, Conall H. Watson, Van-Mai Cao-Lormeau, Anita Teissier, Stéphane Hué, Martin L. Hibberd, Ketan S. Christi, Adam J. Kucharski, Mike Kama, Tuterarii Paoaafaite, Didier Musso, Eric J. Nilles

Publikováno v: Emerging Infectious Diseases
Emerging Infectious Diseases, Vol 25, Iss 8, Pp 1535-1538 (2019)
Emerging Infectious Diseases, 2019, 25 (8), pp.1535-1538. ⟨10.3201/eid2508.180524⟩
Emerging Infectious Diseases, Centers for Disease Control and Prevention, 2019, 25 (8), pp.1535-1538. ⟨10.3201/eid2508.180524⟩

International audience; Zika and chikungunya viruses were first detected in Fiji in 2015. Examining surveillance and phylogenetic and serologic data, we found evidence of low-level transmission of Zika and chikungunya viruses during 2013-2017, in con

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4caa701ae3390984fbd0c75935bfa62
http://europepmc.org/articles/PMC6649350

Reclassification of Haloactinobacterium glacieicola as Occultella glacieicola gen. nov., comb. nov., of Haloactinobacterium album as Ruania alba comb. nov, with an emended description of the genus Ruania, recognition that the genus names Haloactinobacterium and Ruania are heterotypic synonyms and description of Occultella aeris sp. nov., a halotolerant isolate from surface soil sampled at an ancient copper smelter

Autor: Johann Michael Köhler, Rüdiger Pukall, Dominique Clermont, Meina Neumann-Schaal, Peter Schumann, Jialan Cao, Brian J. Tindall, Jan P. Meier-Kolthoff, Alexis Criscuolo, Franziska Kalensee

Publikováno v: International Journal of Systematic and Evolutionary Microbiology
International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2021, 71 (4), ⟨10.1099/ijsem.0.004769⟩
International Journal of Systematic and Evolutionary Microbiology, 2021, 71 (4), ⟨10.1099/ijsem.0.004769⟩

In the course of screening the surface soils of ancient copper mines and smelters (East Harz, Germany) an aerobic, non-motile and halotolerant actinobacterium forming small rods or cocci was isolated. The strain designated F300T developed creamy to y

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::702d9c28154a903b2cba959f9c9e89d5
https://hal-pasteur.archives-ouvertes.fr/pasteur-03259751

Xpert MTB/RIF and Xpert MTB/RIF Ultra for pulmonary tuberculosis and rifampicin resistance in adults

Autor: Karen R Steingart, Deanna Tollefson, Jerry S Zifodya, David J. Horne, Samuel G Schumacher, Eleanor A Ochodo, Ian Schiller, Mikashmi Kohli, Madhukar Pai, Nandini Dendukuri

Publikováno v: The Cochrane Database of Systematic Reviews

Background Xpert MTB/RIF (Xpert MTB/RIF) and Xpert MTB/RIF Ultra (Xpert Ultra), the newest version, are the only World Health Organization (WHO)‐recommended rapid tests that simultaneously detect tuberculosis and rifampicin resistance in persons wi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bdf44f2d414d70e07d197db4cf4cad98
https://pubmed.ncbi.nlm.nih.gov/33616229