Zobrazeno 1 - 10
of 34
pro vyhledávání: '"MAGDALENA A. MOZOLEWSKA"'
Autor:
Chen Keasar, Liam J. McGuffin, Björn Wallner, Gaurav Chopra, Badri Adhikari, Debswapna Bhattacharya, Lauren Blake, Leandro Oliveira Bortot, Renzhi Cao, B. K. Dhanasekaran, Itzhel Dimas, Rodrigo Antonio Faccioli, Eshel Faraggi, Robert Ganzynkowicz, Sambit Ghosh, Soma Ghosh, Artur Giełdoń, Lukasz Golon, Yi He, Lim Heo, Jie Hou, Main Khan, Firas Khatib, George A. Khoury, Chris Kieslich, David E. Kim, Pawel Krupa, Gyu Rie Lee, Hongbo Li, Jilong Li, Agnieszka Lipska, Adam Liwo, Ali Hassan A. Maghrabi, Milot Mirdita, Shokoufeh Mirzaei, Magdalena A. Mozolewska, Melis Onel, Sergey Ovchinnikov, Anand Shah, Utkarsh Shah, Tomer Sidi, Adam K. Sieradzan, Magdalena Ślusarz, Rafal Ślusarz, James Smadbeck, Phanourios Tamamis, Nicholas Trieber, Tomasz Wirecki, Yanping Yin, Yang Zhang, Jaume Bacardit, Maciej Baranowski, Nicholas Chapman, Seth Cooper, Alexandre Defelicibus, Jeff Flatten, Brian Koepnick, Zoran Popović, Bartlomiej Zaborowski, David Baker, Jianlin Cheng, Cezary Czaplewski, Alexandre Cláudio Botazzo Delbem, Christodoulos Floudas, Andrzej Kloczkowski, Stanislaw Ołdziej, Michael Levitt, Harold Scheraga, Chaok Seok, Johannes Söding, Saraswathi Vishveshwara, Dong Xu, Foldit Players consortium, Silvia N. Crivelli
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-18 (2018)
Abstract Every two years groups worldwide participate in the Critical Assessment of Protein Structure Prediction (CASP) experiment to blindly test the strengths and weaknesses of their computational methods. CASP has significantly advanced the field
Externí odkaz:
https://doaj.org/article/b0b847aec1154062a3c86bac14d94e55
Autor:
MAGDALENA A. MOZOLEWSKA
Publikováno v:
TASK Quarterly, Vol 20, Iss 4 (2016)
The iron-sulfur (Fe/S) clusters are the most ancient co-factors of proteins involved in the most essential processes in bacterial systems and yeast, such as Saccharomyces cerevisiae. The main protein involved in the Fe/S cluster transfer is the Iron
Externí odkaz:
https://doaj.org/article/e76fbebf83174b5fb8eafb9f7627da50
Publikováno v:
TASK Quarterly, Vol 18, Iss 4 (2014)
Toll-like receptors (TLRs) are a group of proteins which play a crucial role in the innate immune system. The main function of TLRs is to recognize structurally conserved molecules, which are inserted to the organism of the host by microbes, and then
Externí odkaz:
https://doaj.org/article/a8e8a4bd40a14c13ae54b7777bb1f161
Autor:
PAWEŁ KRUPA, MAGDALENA A. MOZOLEWSKA, BAKHTIYOR RASULEV, CEZARY CZAPLEWSKI, JERZY LESZCZYNSKI
Publikováno v:
TASK Quarterly, Vol 18, Iss 4 (2014)
Even though most of the existing studies of gold nanoparticles indicate that they are safe to use, some researchers show that specific forms of nanoparticles (e.g. nanorods) are able to destroy the cell membrane and very small nanoparticles (below 37
Externí odkaz:
https://doaj.org/article/4da959d977d44d88ac7e9683b76e3a1d
Autor:
Agnieszka S. Karczyńska, Agnieszka G. Lipska, Adam Liwo, Artur Giełdoń, Adam K. Sieradzan, Silvia Crivelli, Karolina Ziȩba, Łukasz Golon, Magdalena A. Mozolewska, Urszula Uciechowska, Sergey A. Samsonov, Magdalena J. Ślusarz, Paweł Krupa, Emilia A. Lubecka, Rafał Ślusarz, Cezary Czaplewski, Celina Sikorska
Publikováno v:
Journal of Molecular Graphics and Modelling. 92:154-166
The recent NEWCT-9P version of the coarse-grained UNRES force field for proteins, with scale-consistent formulas for the local and correlation terms, has been tested in the CASP13 experiment of the blind-prediction of protein structure, in the ab ini
Autor:
Emilia A. Lubecka, Tomasz K Wirecki, Mariusz Makowski, Agnieszka S. Karczyńska, Agnieszka G. Lipska, Paweł Krupa, Adam Liwo, Adam K. Sieradzan, Stanisław Ołdziej, Ewa Gołaś, Magdalena A. Mozolewska, Cezary Czaplewski
Publikováno v:
Protein Folding ISBN: 9781071617151
The physics-based united-residue (UNRES) model of proteins ( www.unres.pl ) has been designed to carry out large-scale simulations of protein folding. The force field has been derived and parameterized based on the principles of statistical-mechanics
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b7c157ffd4e3689033dd069f78e0c20d
https://doi.org/10.1007/978-1-0716-1716-8_23
https://doi.org/10.1007/978-1-0716-1716-8_23
Autor:
Adam K, Sieradzan, Cezary, Czaplewski, Paweł, Krupa, Magdalena A, Mozolewska, Agnieszka S, Karczyńska, Agnieszka G, Lipska, Emilia A, Lubecka, Ewa, Gołaś, Tomasz, Wirecki, Mariusz, Makowski, Stanisław, Ołdziej, Adam, Liwo
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2376
The physics-based united-residue (UNRES) model of proteins ( www.unres.pl ) has been designed to carry out large-scale simulations of protein folding. The force field has been derived and parameterized based on the principles of statistical-mechanics
Autor:
Magdalena A. Mozolewska, Cezary Czaplewski, Adam Liwo, Agnieszka S. Karczyńska, Adam K. Sieradzan, Sergey A. Samsonov, Emilia A. Lubecka, Paweł Krupa
Publikováno v:
Practical Aspects of Computational Chemistry V ISBN: 9783030832438
Practical Aspects of Computational Chemistry V
Practical Aspects of Computational Chemistry V
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e3d1cd386846b85e2e58de9d97d3d3cf
https://doi.org/10.1007/978-3-030-83244-5_2
https://doi.org/10.1007/978-3-030-83244-5_2
Publikováno v:
Bioinformatics. 37:1613-1615
Motivation The majority of the proteins in living organisms occur as homo- or hetero-multimeric structures. Although there are many tools to predict the structures of single-chain proteins or protein complexes with small ligands, peptide–protein an
Autor:
Adam, Liwo, Cezary, Czaplewski, Adam K, Sieradzan, Emilia A, Lubecka, Agnieszka G, Lipska, Łukasz, Golon, Agnieszka, Karczyńska, Paweł, Krupa, Magdalena A, Mozolewska, Mariusz, Makowski, Robert, Ganzynkowicz, Artur, Giełdoń, Maciej, Maciejczyk
Publikováno v:
Progress in molecular biology and translational science. 170
In this chapter the scale-consistent approach to the derivation of coarse-grained force fields developed in our laboratory is presented, in which the effective energy function originates from the potential of mean force of the system under considerat