RS-FISH: Precise, interactive, fast, and scalable FISH spot detection

Autor: K. Kolyvanov, Ella Bahry, M. Zouinkhi, Timothée Lionnet, Leo Epstein, Stephan Preibisch, Kyle Harrington, Xi Long, Laura Breimann

Fluorescent in-situ hybridization (FISH)-based methods are powerful tools to study molecular processes with subcellular resolution, relying on accurate identification and localization of diffraction-limited spots in microscopy images. We developed th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f593516f69b9bd3aa2cd09743492f828
https://doi.org/10.21203/rs.3.rs-992563/v1

Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos.

Autor: Breimann L; Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.; Department of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA.; Department of Genetics, Harvard Medical School, Boston, MA, USA., Bahry E; Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.; Helmholtz Imaging, Max-Delbrück-Center for Molecular Medicine (MDC), Berlin, Germany., Zouinkhi M; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA., Kolyvanov K; Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany., Street LA; Department of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA., Preibisch S; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA., Ercan S; Department of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2024 May 16. Date of Electronic Publication: 2024 May 16.