Zobrazeno 1 - 5
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pro vyhledávání: '"M��kinen, Veli"'
Autor:
Equi, Massimo, Norri, Tuukka, Alanko, Jarno, Cazaux, Bastien, Tomescu, Alexandru I., M��kinen, Veli
Publikováno v:
32nd International Symposium on Algorithms and Computation (ISAAC 2021)
We study the problem of matching a string in a labeled graph. Previous research has shown that unless the Orthogonal Vectors Hypothesis (OVH) is false, one cannot solve this problem in strongly sub-quadratic time, nor index the graph in polynomial ti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::54fb65c15f4d41920c731972214056b4
http://hdl.handle.net/10138/338450
http://hdl.handle.net/10138/338450
A basic problem in metagenomics is to assign a sequenced read to the correct species in the reference collection. In typical applications in genomic epidemiology and viral metagenomics the reference collection consists of set of species with each spe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fc9ea80869ad26789395097066e56328
http://arxiv.org/abs/2006.05871
http://arxiv.org/abs/2006.05871
Publikováno v:
ICALP 2019-46th International Colloquium on Automata, Languages and Programming
ICALP 2019-46th International Colloquium on Automata, Languages and Programming, Jul 2019, Patras, Greece. pp.1-15
ICALP 2019-46th International Colloquium on Automata, Languages and Programming, Jul 2019, Patras, Greece. pp.1-15
Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation graphs in comput
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::941d9a8243037355d18596cec336a9d9
https://inria.hal.science/hal-02338498
https://inria.hal.science/hal-02338498
Publikováno v:
Algorithms for Molecular Biology. 2011, Vol. 6 Issue 1, p23-31. 9p. 1 Diagram, 1 Chart, 1 Graph.
Autor:
Tiina Mäkinen, Veli-Pekka Raatikka, Mika Rytkönen, Jari Jokelainen, Hannu Rintamäki, Reija Ruuhela, Simo Näyhä, Juhani Hassi
Publikováno v:
International Journal of Biometeorology; Sep2006, Vol. 51 Issue 1, p27-36, 10p