Temperature-Dependent tRNA Modifications in Bacillales.

Autor: Hoffmann A; Helmholtz Institute for Metabolic, Obesity and Vascular Research, Helmholtz Zentrum München of the University of Leipzig and University Hospital Leipzig, Philipp-Rosenthal-Str. 27, D-04103 Leipzig, Germany.; Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Härtelstraße 16-18, D-04107 Leipzig, Germany., Lorenz C; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Fallmann J; Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Härtelstraße 16-18, D-04107 Leipzig, Germany., Wolff P; Architecture et Réactivité de l'ARN, Institut de Biologie Moléculaire et Cellulaire du CNRS, Université de Strasbourg, F-67084 Strasbourg, France., Lechner A; Architecture et Réactivité de l'ARN, Institut de Biologie Moléculaire et Cellulaire du CNRS, Université de Strasbourg, F-67084 Strasbourg, France., Betat H; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Mörl M; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Stadler PF; Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, Härtelstraße 16-18, D-04107 Leipzig, Germany.; German Center for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Competence Center for Scalable Data Services and Solutions and Leipzig Research Center for Civilization Diseases, University Leipzig, Puschstrasse 4, D-04103 Leipzig, Germany.; Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, D-04103 Leipzig, Germany.; Institute for Theoretical Chemistry, University of Vienna, Währingerstrasse 17, A-1090 Wien, Austria.; Facultad de Ciencias, Universidad National de Colombia, Bogotá CO-111321, Colombia.; Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA.

Publikováno v: International journal of molecular sciences [Int J Mol Sci] 2024 Aug 13; Vol. 25 (16). Date of Electronic Publication: 2024 Aug 13.

Experience with German Research Consortia in the Field of Chemical Biology of Native Nucleic Acid Modifications.

Autor: Helm M; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, 55128 Mainz, Germany., Bohnsack MT; Department of Molecular Biology, University Medical Center Göttingen, 37073 Göttingen, Germany., Carell T; Department of Chemistry, Ludwig-Maximilians-University Munich, 81377 Munich, Germany., Dalpke A; Department of Infectious Diseases, Medical Microbiology and Hygiene, Heidelberg University Hospital, 69120 Heidelberg, Germany., Entian KD; Institute for Molecular Biosciences, Goethe-University Frankfurt am Main, 60438 Frankfurt am Main, Germany., Ehrenhofer-Murray A; Institute of Biology, Humboldt-Universität zu Berlin, 10115 Berlin, Germany., Ficner R; Institute for Microbiology and Genetics, Georg-August University Göttingen, 37077 Göttingen, Germany., Hammann C; Department of Medicine, HMU Health and Medical University, 14471 Potsdam, Germany., Höbartner C; Institute for Organic Chemistry, Julius-Maximilians-University of Würzburg, 97074 Würzburg, Germany., Jäschke A; Institute for Pharmacy and Molecular Biotechnology, Ruprecht-Karls-University Heidelberg, 69120 Heidelberg, Germany., Jeltsch A; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, 70569 Stuttgart, Germany., Kaiser S; Institute for Pharmaceutical Chemistry, Goethe University Frankfurt am Main, 60438 Frankfurt am Main, Germany., Klassen R; Institute for Biology - Microbiology, University of Kassel, 34132 Kassel, Germany., Leidel SA; Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland., Marx A; Department of Chemistry - Organic/Cellular Chemistry, University of Constance, 78457 Constance, Germany., Mörl M; Institute of Biochemistry, University of Leipzig, 04103 Leipzig, Germany., Meier JC; Department of Cell Physiology, Technical University of Braunschweig, 38106 Brunswick, Germany., Meister G; Institute of Biochemistry, Genetics and Microbiology - Biochemistry I, University of Regensburg, 93053 Regensburg, Germany., Rentmeister A; Institute for Biochemistry, Westphalian Wilhelms University Münster, 48149 Münster, Germany., Rodnina M; Max Planck Institute for Multidisciplinary Sciences, 37077 Göttingen, Germany., Roignant JY; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, 55128 Mainz, Germany.; Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland., Schaffrath R; Institute for Biology - Microbiology, University of Kassel, 34132 Kassel, Germany., Stadler P; Institute for Computer Science - Bioinformatics, University of Leipzig, 04107 Leipzig, Germany., Stafforst T; Interfaculty Institute for Biochemistry, Eberhard Karls University Tübingen, 72074 Tübingen, Germany.

Publikováno v: ACS chemical biology [ACS Chem Biol] 2023 Dec 15; Vol. 18 (12), pp. 2441-2449. Date of Electronic Publication: 2023 Nov 14.

Changes of the tRNA modification pattern during the development of Dictyostelium discoideum

Autor: Hoffmann, A., Erber, L., Betat, H., Mörl, M., Fallmann, J.

Publikováno v: Non-coding RNA 7:32 (2021)

Dictyostelium discoideum is a social amoeba, which on starvation develops from a single-cell state to a multicellular fruiting body. This developmental process is accompanied by massive changes in gene expression, which also affect non-coding RNAs. H

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______3474::9e6a18c8f389c1ef412b41ddb42c74aa
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=62211

Substrate Affinity Versus Catalytic Efficiency: Ancestral Sequence Reconstruction of tRNA Nucleotidyltransferases Solves an Enzyme Puzzle.

Autor: Hager M; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Pöhler MT; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Reinhardt F; Computational EvoDevo Group, Institute for Computer Science, Leipzig University, Härtelstr. 16-18, 04109 Leipzig, Germany.; Interdisciplinary Centre for Bioinformatics, Leipzig University, Härtelstr. 16-18, 04109 Leipzig, Germany., Wellner K; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Hübner J; Computational EvoDevo Group, Institute for Computer Science, Leipzig University, Härtelstr. 16-18, 04109 Leipzig, Germany., Betat H; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany., Prohaska S; Computational EvoDevo Group, Institute for Computer Science, Leipzig University, Härtelstr. 16-18, 04109 Leipzig, Germany.; Interdisciplinary Centre for Bioinformatics, Leipzig University, Härtelstr. 16-18, 04109 Leipzig, Germany.; Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA.; Complexity Science Hub Vienna, Josefstädter Str. 39, 1080 Wien, Austria., Mörl M; Institute for Biochemistry, Leipzig University, Brüderstraße 34, D-04103 Leipzig, Germany.

Publikováno v: Molecular biology and evolution [Mol Biol Evol] 2022 Dec 05; Vol. 39 (12).

Synthetic riboswitches for the analysis of tRNA processing by eukaryotic RNase P enzymes.

Autor: Ender A; Institute for Biochemistry, Leipzig University, 04103 Leipzig, Germany., Grafl N; Institute for Biochemistry, Leipzig University, 04103 Leipzig, Germany., Kolberg T; Institute for Biochemistry, Leipzig University, 04103 Leipzig, Germany., Findeiß S; Bioinformatics Group, Department of Computer Science and Interdisciplinary Center for Bioinformatics, Leipzig University, 04107 Leipzig, Germany., Stadler PF; Bioinformatics Group, Department of Computer Science and Interdisciplinary Center for Bioinformatics, Leipzig University, 04107 Leipzig, Germany.; Max Planck Institute for Mathematics in the Science, 04103 Leipzig, Germany.; Institute for Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria.; Santa Fe Institute, Santa Fe, New Mexico 87501, USA., Mörl M; Institute for Biochemistry, Leipzig University, 04103 Leipzig, Germany.

Publikováno v: RNA (New York, N.Y.) [RNA] 2022 Apr; Vol. 28 (4), pp. 551-567. Date of Electronic Publication: 2022 Jan 12.