Výsledky vyhledávání - "Luiz Thiberio Rangel"

Akademický článek

Novel nitrite reductase domain structure suggests a chimeric denitrification repertoire in the phylum Chloroflexi

Autor: Sarah L. Schwartz, Lily Momper, Luiz Thiberio Rangel, Cara Magnabosco, Jan P. Amend, Gregory P. Fournier

Publikováno v: MicrobiologyOpen, Vol 11, Iss 1, Pp n/a-n/a (2022)

Abstract Denitrification plays a central role in the global nitrogen cycle, reducing and removing nitrogen from marine and terrestrial ecosystems. The flux of nitrogen species through this pathway has a widespread impact, affecting ecological carryin

Externí odkaz: https://doaj.org/article/a4743426f5cd4e08af89305908d6024d

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Akademický článek

Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses

Autor: José S. L. Patané, Joaquim Martins, Luiz Thiberio Rangel, José Belasque, Luciano A. Digiampietri, Agda Paula Facincani, Rafael Marini Ferreira, Fabrício José Jaciani, Yunzeng Zhang, Alessandro M. Varani, Nalvo F. Almeida, Nian Wang, Jesus A. Ferro, Leandro M. Moreira, João C. Setubal

Publikováno v: BMC Genomics, Vol 20, Iss 1, Pp 1-23 (2019)

Abstract Background Xanthomonas citri subsp. citri pathotypes cause bacterial citrus canker, being responsible for severe agricultural losses worldwide. The A pathotype has a broad host spectrum, while A* and Aw are more restricted both in hosts and

Externí odkaz: https://doaj.org/article/6c101edcd1564e90a0c6f3fe46df9789

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Akademický článek

Identification and characterization of putative Aeromonas spp. T3SS effectors.

Autor: Luiz Thiberio Rangel, Jeremiah Marden, Sophie Colston, João Carlos Setubal, Joerg Graf, Johann Peter Gogarten

Publikováno v: PLoS ONE, Vol 14, Iss 6, p e0214035 (2019)

The genetic determinants of bacterial pathogenicity are highly variable between species and strains. However, a factor that is commonly associated with virulent Gram-negative bacteria, including many Aeromonas spp., is the type 3 secretion system (T3

Externí odkaz: https://doaj.org/article/451b8ead5e664dcf9c56759e73383844

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Akademický článek

The Complete Genome Sequence of ‘Candidatus Liberibacter americanus’, Associated with Citrus Huanglongbing

Autor: Nelson A. Wulff, Shujian Zhang, João C. Setubal, Nalvo F. Almeida, Elaine C. Martins, Ricardo Harakava, Dibyendu Kumar, Luiz Thiberio Rangel, Xavier Foissac, Joseph M. Bové, Dean W. Gabriel

Publikováno v: Molecular Plant-Microbe Interactions, Vol 27, Iss 2, Pp 163-176 (2014)

Liberibacter spp. form a Rhizobiaceae clade of phloem-limited pathogens of limited host range. Two obligately parasitic species have been sequenced: ‘Candidatus Liberibacter asiaticus’, which causes citrus huanglongbing (HLB) worldwide, and ‘Ca

Externí odkaz: https://doaj.org/article/5c7611b1cf774e8da7179f734c5ad740

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An Efficient, Nonphylogenetic Method for Detecting Genes Sharing Evolutionary Signals in Phylogenomic Data Sets

Autor: Johann Peter Gogarten, Shannon M. Soucy, Gregory P. Fournier, João C. Setubal, Luiz Thiberio Rangel

Publikováno v: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Genome Biology and Evolution

Assessing the compatibility between gene family phylogenies is a crucial and often computationally demanding step in many phylogenomic analyses. Here, we describe the Evolutionary Similarity Index (IES), a means to assess shared evolution between gen

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d71acb03e001fd54bc70ae6cb0d5d18f
https://doi.org/10.1093/gbe/evab187

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Novel nitrite reductase domain structure suggests a chimeric denitrification repertoire in Phylum Chloroflexi

Autor: Cara Magnabosco, Gregory P. Fournier, Schwartz S, Jan P. Amend, Lily Momper, Luiz Thiberio Rangel

Denitrification plays a central role in the global nitrogen cycle, reducing and removing nitrogen from marine and terrestrial ecosystems. The flux of nitrogen species through this pathway has a widespread impact, affecting ecological carrying capacit

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::7c4d3bf66427f6332793f8b149d63b1c
https://doi.org/10.22541/au.162337328.84022836/v1

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Non-phylogenetic identification of co-evolving genes for reconstructing the archaeal Tree of Life

Autor: Gregory P. Fournier, Luiz Thiberio Rangel, Johann Peter Gogarten, João C. Setubal, Shannon M. Soucy

Assessing the phylogenetic compatibility between individual gene families is a crucial and often computationally demanding step in many phylogenomics analyses. Here we describe the Evolutionary Similarity Index (IES) to assess shared evolution betwee

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::3232022be974d0de3a946654dabf30fe
https://doi.org/10.1101/2020.10.16.343293

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Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses

Autor: Jesus Aparecido Ferro, José S. L. Patané, Leandro Marcio Moreira, Luciano Antonio Digiampietri, Nian Wang, Luiz Thiberio Rangel, Fabrício José Jaciani, Agda Paula Facincani, Joaquim Martins, Alessandro M. Varani, José Belasque, Rafael Marini Ferreira, Yunzeng Zhang, Nalvo F. Almeida, João C. Setubal

Publikováno v: Scopus
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
BMC Genomics
BMC Genomics, Vol 20, Iss 1, Pp 1-23 (2019)
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Repositório Institucional da UFOP
Universidade Federal de Ouro Preto (UFOP)
instacron:UFOP

Made available in DSpace on 2019-10-06T16:50:25Z (GMT). No. of bitstreams: 0 Previous issue date: 2019-09-09 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Background: Xanthomonas citri subsp. citri pathotypes cause bacterial

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d6fb79127d3ada19925fc5264e388d91

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Identification and characterization of putative Aeromonas spp. T3SS effectors

Autor: Sophie M. Colston, Jeremiah N. Marden, Joerg Graf, João C. Setubal, Luiz Thiberio Rangel, Johann Peter Gogarten

Publikováno v: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
PLoS ONE
PLoS ONE, Vol 14, Iss 6, p e0214035 (2019)

The genetic determinants of bacterial pathogenicity are highly variable between species and strains. However, a factor that is commonly associated with virulent Gram-negative bacteria, including manyAeromonasspp., is the type 3 secretion system (T3SS

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c21d0e90f03b0813071218085c31434d

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The candidatus liberibacter–host interface: insights into pathogenesis mechanisms and disease control

Autor: Jinyun Li, Nian Wang, Elizabeth A. Pierson, Jin Xu, Luiz Thiberio Rangel, Julien Levy, Yunzeng Zhang, João C. Setubal, Joaquim Martins

Publikováno v: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP

“Candidatus Liberibacter” species are associated with economically devastating diseases of citrus, potato, and many other crops. The importance of these diseases as well as the proliferation of new diseases on a wider host range is likely to incr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99a85b7b89e7e246cbc3c8041f6c1be8

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