Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics.

Autor: Rachel Poretsky, Luis M Rodriguez-R, Chengwei Luo, Despina Tsementzi, Konstantinos T Konstantinidis

Publikováno v: PLoS ONE, Vol 9, Iss 4, p e93827 (2014)

This study explored the short-term planktonic microbial community structure and resilience in Lake Lanier (GA, USA) while simultaneously evaluating the technical aspects of identifying taxa via 16S rRNA gene amplicon and metagenomic sequence data. 16

Externí odkaz: https://doaj.org/article/bb971859f8394dca842a1e4c74ecfd32

Corrigendum: Naming the unnamed: over 65,000 Candidatus names for unnamed Archaea and Bacteria in the Genome Taxonomy Database

Autor: Mark J. Pallen, Luis M. Rodriguez-R, Nabil-Fareed Alikhan

Publikováno v: International Journal of Systematic and Evolutionary Microbiology. 73

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::0681e44b848771304cbbf152b01cdda4
https://doi.org/10.1099/ijsem.0.005885

Wood decay fungi and their bacterial interaction partners in the built environment – A systematic review on fungal bacteria interactions in dead wood and timber

Autor: Julia Embacher, Susanne Zeilinger, Martin Kirchmair, Luis M. Rodriguez-R, Sigrid Neuhauser

Publikováno v: Fungal Biology Reviews. 45:100305

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::1a86f79a98da11b899b74dff5a288d9f
https://doi.org/10.1016/j.fbr.2022.100305

Successful Kinetic Impact into an Asteroid for Planetary Defense

Autor: R. Terik Daly, Carolyn M. Ernst, Olivier S. Barnouin, Nancy L. Chabot, Andrew S. Rivkin, Andrew F. Cheng, Elena Y. Adams, Harrison F. Agrusa, Elisabeth D. Abel, Amy L. Alford, Erik I. Asphaug, Justin A. Atchison, Andrew R. Badger, Paul Baki, Ronald-L. Ballouz, Dmitriy L. Bekker, Julie Bellerose, Shyam Bhaskaran, Bonnie J. Buratti, Saverio Cambioni, Michelle H. Chen, Steven R. Chesley, George Chiu, Gareth S. Collins, Matthew W. Cox, Mallory E. DeCoster, Peter S. Ericksen, Raymond C. Espiritu, Alan S. Faber, Tony L. Farnham, Fabio Ferrari, Zachary J. Fletcher, Robert W. Gaskell, Dawn M. Graninger, Musad A. Haque, Patricia A. Harrington-Duff, Sarah Hefter, Isabel Herreros, Masatoshi Hirabayashi, Philip M. Huang, Syau-Yun W. Hsieh, Seth A. Jacobson, Stephen N. Jenkins, Mark A. Jensenius, Jeremy W. John, Martin Jutzi, Tomas Kohout, Timothy O. Krueger, Frank E. Laipert, Norberto R. Lopez, Robert Luther, Alice Lucchetti, Declan M. Mages, Simone Marchi, Anna C. Martin, Maria E. McQuaide, Patrick Michel, Nicholas A. Moskovitz, Ian W. Murphy, Naomi Murdoch, Shantanu P. Naidu, Hari Nair, Michael C. Nolan, Jens Ormö, Maurizio Pajola, Eric E. Palmer, James M. Peachey, Petr Pravec, Sabina D. Raducan, K. T. Ramesh, Joshua R. Ramirez, Edward L. Reynolds, Joshua E. Richman, Colas Q. Robin, Luis M. Rodriguez, Lew M. Roufberg, Brian P. Rush, Carolyn A. Sawyer, Daniel J. Scheeres, Petr Scheirich, Stephen R. Schwartz, Matthew P. Shannon, Brett N. Shapiro, Caitlin E. Shearer, Evan J. Smith, R. Joshua Steele, Jordan K. Steckloff, Angela M. Stickle, Jessica M. Sunshine, Emil A. Superfin, Zahi B. Tarzi, Cristina A. Thomas, Justin R. Thomas, Josep M. Trigo-Rodríguez, B. Teresa Tropf, Andrew T. Vaughan, Dianna Velez, C. Dany Waller, Daniel S. Wilson, Kristin A. Wortman, Yun Zhang

Publikováno v: Nature
Nature, 2023, 616, pp.443-447. ⟨10.1038/s41586-023-05810-5⟩

While no known asteroid poses a threat to Earth for at least the next century, the catalog of near-Earth asteroids is incomplete for objects whose impacts would produce regional devastation. Several approaches have been proposed to potentially preven

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4f78e5a4ef0a89a92cae13658ec5011

GSearch: Ultra-Fast and Scalable Microbial Genome Search by Combining Kmer Hashing with Hierarchical Navigable Small World Graphs

Autor: Jianshu Zhao, Jean Pierre Both, Luis M. Rodriguez-R, Konstantinos T. Konstantinidis

Genome search and/or classification is a key step in microbiome studies and has recently become more challenging due to the increasing number of available (reference) genomes and the fact that traditional methods do not scale well with larger databas

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::adaa6f060bd4b95e1128ee42aaf60967
https://doi.org/10.1101/2022.10.21.513218