Zobrazeno 1 - 10
of 52
pro vyhledávání: '"Lucie Bittner"'
Publikováno v:
iScience, Vol 27, Iss 7, Pp 110371- (2024)
Summary: Ab initio computational reconstructions of protein-protein interaction (PPI) networks will provide invaluable insights into cellular systems, enabling the discovery of novel molecular interactions and elucidating biological mechanisms within
Externí odkaz:
https://doaj.org/article/37b37cb66f144cc782610e2d61e925b0
Autor:
Iris Rizos, Pavla Debeljak, Thomas Finet, Dylan Klein, Sakina-Dorothée Ayata, Fabrice Not, Lucie Bittner
Publikováno v:
ISME Communications, Vol 3, Iss 1, Pp 1-11 (2023)
Abstract Marine protists are major components of the oceanic microbiome that remain largely unrepresented in culture collections and genomic reference databases. The exploration of this uncharted protist diversity in oceanic communities relies essent
Externí odkaz:
https://doaj.org/article/18f2e70073d3483c9592b6c563a83aa7
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-15 (2021)
Advances in omics approaches could enable quantitative predictions of microbial functional composition. Here the authors re-analyze 885 metagenome-assembled genomes from Tara Oceans, and use a network approach to quantify protein functional clusters
Externí odkaz:
https://doaj.org/article/3366eab140e6454e8cf47daed657b36f
Autor:
Arnaud Meng, Camille Marchet, Erwan Corre, Pierre Peterlongo, Adriana Alberti, Corinne Da Silva, Patrick Wincker, Eric Pelletier, Ian Probert, Johan Decelle, Stéphane Le Crom, Fabrice Not, Lucie Bittner
Publikováno v:
Microbiome, Vol 6, Iss 1, Pp 1-15 (2018)
Abstract Background Study of meta-transcriptomic datasets involving non-model organisms represents bioinformatic challenges. The production of chimeric sequences and our inability to distinguish the taxonomic origins of the sequences produced are inh
Externí odkaz:
https://doaj.org/article/a367a9a8b6f544fa94dca9b47b8503cf
Autor:
Hugo Botebol, Gaelle Lelandais, Christophe Six, Emmanuel Lesuisse, Arnaud Meng, Lucie Bittner, Stéphane Lecrom, Robert Sutak, Jean-Claude Lozano, Philippe Schatt, Valérie Vergé, Stéphane Blain, François-Yves Bouget
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-11 (2017)
Abstract Iron is an essential micronutrient involved in many biological processes and is often limiting for primary production in large regions of the World Ocean. Metagenomic and physiological studies have identified clades or ecotypes of marine phy
Externí odkaz:
https://doaj.org/article/c446f38b5de149cbb18e793c482605a8
Autor:
Guillem Chust, Meike Vogt, Fabio Benedetti, Teofil Nakov, Sébastien Villéger, Anaïs Aubert, Sergio M. Vallina, Damiano Righetti, Fabrice Not, Tristan Biard, Lucie Bittner, Anne-Sophie Benoiston, Lionel Guidi, Ernesto Villarino, Charlie Gaborit, Astrid Cornils, Lucie Buttay, Jean-Olivier Irisson, Marlène Chiarello, Alessandra L. Vallim, Leocadio Blanco-Bercial, Laura Basconi, François Guilhaumon, Sakina-Dorothée Ayata
Publikováno v:
Frontiers in Marine Science, Vol 4 (2017)
Externí odkaz:
https://doaj.org/article/07ffd7a527e3428db9cc46d6be13c18b
Autor:
Elianne Egge, Lucie Bittner, Tom Andersen, Stéphane Audic, Colomban de Vargas, Bente Edvardsen
Publikováno v:
PLoS ONE, Vol 8, Iss 9, p e74371 (2013)
Next generation sequencing of ribosomal DNA is increasingly used to assess the diversity and structure of microbial communities. Here we test the ability of 454 pyrosequencing to detect the number of species present, and assess the relative abundance
Externí odkaz:
https://doaj.org/article/12b190e48cf3466981d64de0c7089dec
My PhD project focuses on the uncultivable marine protist lineage of Radiolaria. In order to elucidate their life cycle and shed light onto the long speculated reproductive radiolarian cycle, the functional profile of single-cell transcriptomes of va
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3d5b400616666691b5cc15fbd5382197
Autor:
Ophélie Da Silva, Sakina‐Dorothée Ayata, Enrico Ser‐Giacomi, Jade Leconte, Eric Pelletier, Cécile Fauvelot, Mohammed‐Amin Madoui, Lionel Guidi, Fabien Lombard, Lucie Bittner
Publikováno v:
Environmental Microbiology (1462-2912) (Wiley), 2022-12, Vol. 24, N. 12, P. 6086-6099
Environmental Microbiology
Environmental Microbiology, In press, ⟨10.1111/1462-2920.16171⟩
Environmental Microbiology
Environmental Microbiology, In press, ⟨10.1111/1462-2920.16171⟩
International audience; For more than a decade, high-throughput sequencing has transformed the study of marine planktonic communities and has highlighted the extent of protist diversity in these ecosystems. Nevertheless, little is known relative to t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f54055ac33bee1ce0503a8a323ec27e3
https://archimer.ifremer.fr/doc/00788/90038/
https://archimer.ifremer.fr/doc/00788/90038/
Autor:
Iris Rizos, Pavla Debeljak, Thomas Finet, Dylan Klein, Sakina-Dorothée Ayata, Fabrice Not, Lucie Bittner
Publikováno v:
Preprint (Cold Spring Harbor Laboratory), 2022-07-24
Marine protists are major components of the oceanic microbiome that remain largely unrepresented in culture collections and genomic reference databases. The exploration of this uncharted protist diversity in oceanic communities relies essentially on
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f4ac0c271dc6a86da65a25e062ca0b5f
https://archimer.ifremer.fr/doc/00808/92026/
https://archimer.ifremer.fr/doc/00808/92026/