Zobrazeno 1 - 10
of 35
pro vyhledávání: '"Luca Tubiana"'
Autor:
Jules Morand, Shoichi Yip, Yannis Velegrakis, Gianluca Lattanzi, Raffaello Potestio, Luca Tubiana
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-13 (2024)
Abstract We discuss how to assess the reliability of partial, anonymized mobility data and compare two different methods to identify spatial communities based on movements: Greedy Modularity Clustering (GMC) and the novel Critical Variable Selection
Externí odkaz:
https://doaj.org/article/bc9cdc34bc7a45e0805ecac8f007d491
Publikováno v:
Physical Review X, Vol 13, Iss 2, p 021010 (2023)
Kinetoplast DNA (kDNA) is a two-dimensional Olympic-ring-like network of mutually linked DNA minicircles found in certain parasites called trypanosomes. Understanding the self-assembly and replication of this structure are not only major open questio
Externí odkaz:
https://doaj.org/article/1b0c945aa2c34735b17c81121d51d81a
Autor:
Chiara Cardelli, Valentino Bianco, Lorenzo Rovigatti, Francesca Nerattini, Luca Tubiana, Christoph Dellago, Ivan Coluzza
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-10 (2017)
Abstract Heteropolymers are important examples of self-assembling systems. However, in the design of artificial heteropolymers the control over the single chain self-assembling properties does not reach that of the natural bio-polymers, and in partic
Externí odkaz:
https://doaj.org/article/18aa4f50970942d0845915aecd7cea5e
Autor:
Elias Melas, Luca Tubiana, Enzo Orlandini, Davide Michieletto, Marco Baiesi, Yair Augusto Gutierrez Fosado
How type 2 Topoisomerase (TopoII) proteins relax and simplify the topology of DNA molecules is one of the most intriguing open questions in genome and DNA biophysics. Most of the existing models neglect the dynamics of TopoII which is characteristics
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dd0408d674b6a4a6200ff1814686e949
https://doi.org/10.1101/2021.08.28.458016
https://doi.org/10.1101/2021.08.28.458016
Autor:
Raffaello Potestio, Kostas Ch. Daoulas, Peter Virnau, Burkhard Dünweg, Kurt Kremer, Luca Tubiana, Hideki Kobayashi
Publikováno v:
Journal of Physics: Condensed Matter
Recent theoretical studies have demonstrated that the behaviour of molecular knots is a sensitive indicator of polymer structure. Here, we use knots to verify the ability of two state-of-the-art algorithms—configuration assembly and hierarchical ba
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::155fc05ece520f73834c752e2848e895
Autor:
Chiara Cardelli, Francesca Nerattini, Christoph Dellago, Valentino Bianco, Ivan Coluzza, Luca Tubiana
Publikováno v:
Scientific Reports
Scientific Reports, Vol 10, Iss 1, Pp 1-8 (2020)
Scientific Reports, Vol 10, Iss 1, Pp 1-8 (2020)
Isolating the properties of proteins that allow them to convert sequence into the structure is a long-lasting biophysical problem. In particular, studies focused extensively on the effect of a reduced alphabet size on the folding properties. However,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ecaa96a8253a2979225c87a97bfd42cb
https://doi.org/10.1038/s41598-020-59401-9
https://doi.org/10.1038/s41598-020-59401-9
Autor:
Chiara Cardelli, Valentino Bianco, Ivan Coluzza, Christoph Dellago, Francesca Nerattini, Luca Tubiana
Publikováno v:
Macromolecules. 51:8346-8356
Obtaining complex topological micro- and nanomaterials in a controlled way is an open challenge for material science and chemistry. Recent experimental and computational studies have demonstrated the feasibility of self-assembling knots with up to ei
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c33c3a03b1e2076e3df86e5feb03a018
https://doi.org/10.1021/acs.macromol.8b01359
https://doi.org/10.1021/acs.macromol.8b01359
Autor:
Ivan Coluzza, Francesca Nerattini, Luca Tubiana, Christoph Dellago, Valentino Bianco, Chiara Cardelli, Matteo Figliuzzi
Publikováno v:
Chemphyschem : a European journal of chemical physics and physical chemistry. 21(4)
Protein sequence stores the information relative to both functionality and stability, thus making it difficult to disentangle the two contributions. However, the identification of critical residues for function and stability has important implication
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fa71dcf0392c367bdaa2cb7cd1c29ea4
https://pubmed.ncbi.nlm.nih.gov/31944517
https://pubmed.ncbi.nlm.nih.gov/31944517
Autor:
Valentino Bianco, Luca Tubiana, Francesca Nerattini, Christoph Dellago, Chiara Cardelli, Ivan Coluzza
Publikováno v:
Journal of chemical theory and computation. 15(2)
Molecular recognition is a critical process for many biological functions and consists in noncovalent binding of different molecules, such as protein-protein, antigen-antibody, and many others. The host-guest molecules involved often show a shape com
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3308c4e91ff07733775d911ada885345
https://pubmed.ncbi.nlm.nih.gov/30537827
https://pubmed.ncbi.nlm.nih.gov/30537827