Zobrazeno 1 - 10
of 146
pro vyhledávání: '"Lubomír, Rulíšek"'
Autor:
Michal Tupec, Martin Culka, Aleš Machara, Stanislav Macháček, Daniel Bím, Aleš Svatoš, Lubomír Rulíšek, Iva Pichová
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 20, Iss , Pp 1378-1388 (2022)
A recently proposed reaction mechanism of soluble Δ9 desaturase (Δ9D) allowed us to identify auxiliary residues His203, Asp101, Thr206 and Cys222 localized near the di-iron active site that are supposedly involved in the proton transfer (PT) to and
Externí odkaz:
https://doaj.org/article/47cf60acbf0b4ad0a35769b2f757cb87
Autor:
Oldřich Hudeček, Roberto Benoni, Paul E. Reyes-Gutierrez, Martin Culka, Hana Šanderová, Martin Hubálek, Lubomír Rulíšek, Josef Cvačka, Libor Krásný, Hana Cahová
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
Nicotinamide adenine dinucleotide and coenzyme A serve as a 5′-cap of prokaryotic RNA. Here the authors report that methylated and non-methylated dinucleoside polyphosphates (Np n Ns) exist as Escherichia coli RNA caps which can be cleaved by 5′-
Externí odkaz:
https://doaj.org/article/a626bb909a284b82ac5da5fc2819c265
Publikováno v:
Journal of Chemical Theory and Computation. 19:1014-1022
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4a4d469659070a70d2d2e2bfe1a53a59
https://doi.org/10.1021/acs.jctc.2c00919
https://doi.org/10.1021/acs.jctc.2c00919
Publikováno v:
Chemistry : a European Journal, 29, 26, pp. 1-9
Chemistry : a European Journal, 29, 1-9
Chemistry : a European Journal, 29, 1-9
Contains fulltext : 292790.pdf (Publisher’s version ) (Open Access)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2ce08495d64e7b3dc1a8659adc493093
https://doi.org/10.1002/chem.202203769
https://doi.org/10.1002/chem.202203769
Autor:
Ioannis, Kipouros, Agnieszka, Stańczak, Jake W, Ginsbach, Prokopis C, Andrikopoulos, Lubomír, Rulíšek, Edward I, Solomon
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 119(33)
Melanins are highly conjugated biopolymer pigments that provide photoprotection in a wide array of organisms, from bacteria to humans. The rate-limiting step in melanin biosynthesis, which is the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::3841f6cdfb08948e4f3ed0f431c0e695
https://pubmed.ncbi.nlm.nih.gov/35939688
https://pubmed.ncbi.nlm.nih.gov/35939688
Autor:
Daniel Bím, Michal Navrátil, Ondrej Gutten, Jan Konvalinka, Zsófia Kutil, Martin Culka, Václav Navrátil, Anastassia N. Alexandrova, Cyril Bařinka, Lubomír Rulíšek
Publikováno v:
The Journal of Physical Chemistry B. 126:132-143
Quantum and molecular mechanics (QM/MM) and QM-only (cluster model) modeling techniques represent the two workhorses in mechanistic understanding of enzyme catalysis. One of the stringent tests for QM/MM and/or QM approaches is to provide quantitativ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::41362eb0c51b8444cb2511c8f700512b
https://doi.org/10.1021/acs.jpcb.1c09240
https://doi.org/10.1021/acs.jpcb.1c09240
Autor:
Ioannis Kipouros, Agnieszka Stańczak, Jake W. Ginsbach, Prokopis C. Andrikopoulos, Lubomír Rulíšek, Edward I. Solomon
Publikováno v:
Proceedings of the National Academy of Sciences. 119
Melanins are highly conjugated biopolymer pigments that provide photoprotection in a wide array of organisms, from bacteria to humans. The rate-limiting step in melanin biosynthesis, which is the ortho -hydroxylation of the amino acid L-tyrosine to L
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9ff09d2dc2e16758c781e0184efc4599
https://doi.org/10.1073/pnas.2205619119
https://doi.org/10.1073/pnas.2205619119
Publikováno v:
The journal of physical chemistry. B. 126(32)
We extensively mapped energy landscapes and conformations of 22 (including three His protonation states) proteinogenic α-amino acids in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f8d0ce0467c93721f558226e91b99c93
https://pubmed.ncbi.nlm.nih.gov/35930560
https://pubmed.ncbi.nlm.nih.gov/35930560
Publikováno v:
ChemMedChem. 17
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::21456333f85ec811dc430e77aa3b7fb0
https://doi.org/10.1002/cmdc.202200403
https://doi.org/10.1002/cmdc.202200403
Publikováno v:
Journal of Biomolecular Structure and Dynamics. 40:10250-10264
Human stimulator of interferon genes (hSTING) is a signaling adaptor protein that triggers innate immune system by response to cytosolic DNA and second messenger cyclic dinucleotides (CDNs). Natural CDNs contain purine nucleobase with different phosp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dab1c7731921d9087a24e17c8b24cff3
https://doi.org/10.1080/07391102.2021.1942213
https://doi.org/10.1080/07391102.2021.1942213