Zobrazeno 1 - 10
of 70
pro vyhledávání: '"Liskin Swint‐Kruse"'
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-16 (2023)
Abstract Although homologous protein sequences are expected to adopt similar structures, some amino acid substitutions can interconvert α-helices and β-sheets. Such fold switching may have occurred over evolutionary history, but supporting evidence
Externí odkaz:
https://doaj.org/article/faaa7ba8e37048b58bc55e7c57669d53
Autor:
Filipa L. Sousa, Daniel J. Parente, Jacob A. Hessman, Allen Chazelle, Sarah A. Teichmann, Liskin Swint-Kruse
Publikováno v:
Data in Brief, Vol 8, Iss , Pp 948-957 (2016)
The AlloRep database (www.AlloRep.org) (Sousa et al., 2016) [1] compiles extensive sequence, mutagenesis, and structural information for the LacI/GalR family of transcription regulators. Sequence alignments are presented for >3000 proteins in 45 para
Externí odkaz:
https://doaj.org/article/2f666fecd6d44ebfbc4e0eb3d3e2489f
Publikováno v:
PLoS ONE, Vol 8, Iss 12, p e83502 (2013)
The millions of protein sequences generated by genomics are expected to transform protein engineering and personalized medicine. To achieve these goals, tools for predicting outcomes of amino acid changes must be improved. Currently, advances are ham
Externí odkaz:
https://doaj.org/article/8c7352ef15424311b1c6603b97f83fa8
Autor:
Daniel J Parente, Liskin Swint-Kruse
Publikováno v:
PLoS ONE, Vol 8, Iss 12, p e84398 (2013)
Protein families might evolve paralogous functions on their common tertiary scaffold in two ways. First, the locations of functionally-important sites might be "hard-wired" into the structure, with novel functions evolved by altering the amino acid (
Externí odkaz:
https://doaj.org/article/f85a10e3bf3440b69e37aa0280408c13
Although homologous protein sequences are expected to adopt similar structures, some amino acid substitutions can interconvert α-helices and β-sheets. Such fold switching may have occurred over evolutionary history, but supporting evidence has been
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e2573a0516899d8cd1a28bf78487492f
https://doi.org/10.1101/2022.12.08.519646
https://doi.org/10.1101/2022.12.08.519646
Publikováno v:
Biophysical Journal. 122:189a-190a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2ef1f635025b3a4153eee2fd184d12d4
https://doi.org/10.1016/j.bpj.2022.11.1163
https://doi.org/10.1016/j.bpj.2022.11.1163
Autor:
Braelyn M. Page, Tyler A. Martin, Collette L. Wright, Lauren A. Fenton, Maite T. Villar, Qingling Tang, Antonio Artigues, Audrey Lamb, Aron W. Fenton, Liskin Swint‐Kruse
Publikováno v:
Protein Sci
Various protein properties are often illuminated using sequence comparisons of protein homologs. For example, in analyses of the pyruvate kinase multiple sequence alignment, the set of positions that changed during speciation (“phylogenetic” posi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7232d0070dd3b327c11b60df589d0390
https://doi.org/10.1002/pro.4336
https://doi.org/10.1002/pro.4336
Publikováno v:
Protein Sci
Every method used to quantify biomolecular interactions has its own strengths and limitations. To quantify protein‐DNA binding affinities, nitrocellulose filter binding assays with (32)P‐labeled DNA quantify K (d) values from 10(−12) to 10(−8
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ceedc2b1738bd0a651e4f64726cbb414
https://doi.org/10.1002/pro.3827
https://doi.org/10.1002/pro.3827
Autor:
Melissa J, Ruggiero, Shipra, Malhotra, Aron W, Fenton, Liskin, Swint-Kruse, John, Karanicolas, Bruno, Hagenbuch
Publikováno v:
International journal of molecular sciences. 23(6)
In the Na
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::038652a0c20570cc130644e496e1b0aa
https://pubmed.ncbi.nlm.nih.gov/35328632
https://pubmed.ncbi.nlm.nih.gov/35328632
Autor:
Pierce T. ONeil, Katheryn Vela, Braelyn M. Page, Jeffrey S. McFarlane, Collette L. Wright, Kathleen M. Meneely, Aron W. Fenton, Audrey L. Lamb, Liskin Swint-Kruse
Publikováno v:
Biophysical Journal. 122:475a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::99824dbf5e67cac124442a9322133994
https://doi.org/10.1016/j.bpj.2022.11.2545
https://doi.org/10.1016/j.bpj.2022.11.2545