Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Lisa Marie Simon"'
Autor:
Edoardo Morandi, Matteo Cereda, Danny Incarnato, Caterina Parlato, Giulia Basile, Francesca Anselmi, Andrea Lauria, Lisa Marie Simon, Isabelle Laurence Polignano, Francesca Arruga, Silvia Deaglio, Elisa Tirtei, Franca Fagioli, Salvatore Oliviero
Publikováno v:
PLoS ONE, Vol 14, Iss 10, p e0222512 (2019)
BACKGROUND:Next generation sequencing methods are widely adopted for a large amount of scientific purposes, from pure research to health-related studies. The decreasing costs per analysis led to big amounts of generated data and to the subsequent imp
Externí odkaz:
https://doaj.org/article/c09c95f6b80e443987914be4ccde3262
Autor:
Mara Maldotti, Andrea Lauria, Francesca Anselmi, Ivan Molineris, Annalaura Tamburrini, Guohua Meng, Isabelle Laurence Polignano, Mirko Giuseppe Scrivano, Fabiola Campestre, Lisa Marie Simon, Stefania Rapelli, Edoardo Morandi, Danny Incarnato, Salvatore Oliviero
Publikováno v:
Nucleic Acids Research, 50(5):gkac083, 2587-2602. Oxford University Press
The histone acetyltransferase p300 (also known as KAT3B) is a general transcriptional coactivator that introduces the H3K27ac mark on enhancers triggering their activation and gene transcription. Genome-wide screenings demonstrated that a large fract
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::45c0b947a4eb0e6609c0421e4a1f0dcf
https://research.rug.nl/en/publications/b53bf097-bee2-40e7-b52d-11729392e38d
https://research.rug.nl/en/publications/b53bf097-bee2-40e7-b52d-11729392e38d
Autor:
Edoardo Morandi, Martijn J. van Hemert, Ilaria Manfredonia, Francesca Anselmi, Salvatore Oliviero, Lisa Marie Simon, Danny Incarnato
Publikováno v:
Nature Methods, 18:s41592-021-01075-w, 249-252. Nature Publishing Group
Nature Methods, 18(3), 249-252. NATURE RESEARCH
Nature Methods, 18(3), 249-252. NATURE RESEARCH
RNA structure heterogeneity is a major challenge when querying RNA structures with chemical probing. We introduce DRACO, an algorithm for the deconvolution of coexisting RNA conformations from mutational profiling experiments. Analysis of the SARS-Co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ed35d87166f56f7978c562bbb54d6d0c
https://research.rug.nl/en/publications/81871470-320e-4db7-8337-1a1ef4a0f723
https://research.rug.nl/en/publications/81871470-320e-4db7-8337-1a1ef4a0f723
Autor:
Lisa Marie Simon, Edoardo Morandi, Luis Martinez-Sobrido, Danny Incarnato, Douglas H. Turner, Giorgio Gribaudo, Salvatore Oliviero, Anna Luganini
Publikováno v:
Nucleic Acids Research, 47(13), 7003-7017. Oxford University Press
Nucleic Acids Research
Nucleic Acids Research
The influenza A virus (IAV) is a continuous health threat to humans as well as animals due to its recurring epidemics and pandemics. The IAV genome is segmented and the eight negative-sense viral RNAs (vRNAs) are transcribed into positive sense compl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::83245e161f9861f8ea0c86fc0a1da47c
http://hdl.handle.net/2318/1704547
http://hdl.handle.net/2318/1704547
Autor:
Lisa Marie Simon, Edoardo Morandi, Isabelle Laurence Polignano, Silvia Deaglio, Giulia Basile, Andrea Lauria, Danny Incarnato, Caterina Parlato, Salvatore Oliviero, Elisa Tirtei, Matteo Cereda, Francesca Arruga, Francesca Anselmi, Franca Fagioli
Publikováno v:
PLoS ONE
PLoS ONE, 14(10):e0222512. PUBLIC LIBRARY SCIENCE
PLoS ONE, Vol 14, Iss 10, p e0222512 (2019)
PLoS ONE, 14(10):e0222512. PUBLIC LIBRARY SCIENCE
PLoS ONE, Vol 14, Iss 10, p e0222512 (2019)
BACKGROUND: Next generation sequencing methods are widely adopted for a large amount of scientific purposes, from pure research to health-related studies. The decreasing costs per analysis led to big amounts of generated data and to the subsequent im
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5abe40f32da2a81e32ff7f2f0e0c7122
http://hdl.handle.net/2318/1800726
http://hdl.handle.net/2318/1800726
Publikováno v:
Nucleic Acids Research, 46(16):nar/gky486. Oxford University Press
RNA is emerging as a key regulator of a plethora of biological processes. While its study has remained elusive for decades, the recent advent of high-throughput sequencing technologies provided the unique opportunity to develop novel techniques for t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9eb7cc65bc076c5a95a4e63f637f663a
https://hdl.handle.net/11370/55816526-f86c-44db-b72e-5f995e5dc534
https://hdl.handle.net/11370/55816526-f86c-44db-b72e-5f995e5dc534
Autor:
Lisa Marie Simon, Edoardo Morandi, Francesca Anselmi, Giulia Basile, Danny Incarnato, Salvatore Oliviero
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, 45(16):nar/gkx617, 9716-9725. Oxford University Press
Nucleic Acids Research, 45(16):nar/gkx617, 9716-9725. Oxford University Press
Defining the in vivo folding pathway of cellular RNAs is essential to understand how they reach their final native conformation. We here introduce a novel method, named Structural Probing of Elongating Transcripts (SPET-seq), that permits single-base
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a672334341bdb0e127629c771d14c3b
http://hdl.handle.net/2318/1706468
http://hdl.handle.net/2318/1706468