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The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

Autor: Liolios K, Mavromatis K, Nektarios Tavernarakis, Nc, Kyrpides

Publikováno v: Nucleic Acids Research
Europe PubMed Central

The Genomes On Line Database (GOLD) is a comprehensive resource that provides information on genome and metagenome projects worldwide. Complete and ongoing projects and their associated metadata can be accessed in GOLD through pre-computed lists and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::12cad4f0ae51fe9a0b6fb294c9416ec2
https://doi.org/10.1093/nar/gkm884

Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae

Autor: Scheuner, C, Tindall, BJ, Lu, M, Nolan, M, Lapidus, A, Cheng, JF, Goodwin, L, Pitluck, S, Huntemann, M, Liolios, K, Pagani, I, Mavromatis, K, Ivanova, N, Pati, A, Chen, A, Palaniappan, K, Jeffries, CD, Hauser, L, Land, M, Mwirichia, R, Rohde, M, Abt, B, Detter, JC, Woyke, T, Eisen, JA, Markowitz, V, Hugenholtz, P, Göker, M, Kyrpides, NC, Klenk, HP

Publikováno v: Scheuner, C; Tindall, BJ; Lu, M; Nolan, M; Lapidus, A; Cheng, JF; et al.(2014). Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae. Standards in Genomic Sciences, 9(1), 10. doi: 10.1186/1944-3277-9-10. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/5bz6f3qw

© 2014 Scheuner et al.; licensee BioMed Central Ltd. Planctomyces brasiliensis Schlesner 1990 belongs to the order Planctomycetales, which differs from other bacterial taxa by several distinctive features such as internal cell compartmentalization,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::506fb581a75dae9838c367ef6dd35542
http://www.escholarship.org/uc/item/5bz6f3qw

Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl

Autor: Anderson, I, Teshima, H, Nolan, M, Lapidus, A, Tice, H, Del Rio, TG, Cheng, JF, Han, C, Tapia, R, Goodwin, LA, Pitluck, S, Liolios, K, Mavromatis, K, Pagani, I, Ivanova, N, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Rohde, M, Lang, E, Detter, JC, Göker, M, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP

Publikováno v: Anderson, I; Teshima, H; Nolan, M; Lapidus, A; Tice, H; Del Rio, TG; et al.(2013). Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl. Standards in Genomic Sciences, 9(1), 83-92. doi: 10.4056/sigs.4338002. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/0rj32607

Frateuria aurantia (ex Kondô and Ameyama 1958) Swings et al. 1980 is a member of the bispecific genus Frateuria in the family Xanthomonadaceae, which is already heavily tar-geted for non-type strain genome sequencing. Strain Kondô 67Twas initially

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::ce67b39c51ebd66ecb2fb1fdab96611c
http://www.escholarship.org/uc/item/0rj32607

Complete genome sequence of riemerella anatipestifer type strain (ATCC 11845 T)

Autor: Mavromatis, K, Lu, M, Misra, M, Lapidus, A, Nolan, M, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Pagani, I, Ivanova, N, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Jeffries, CD, Detter, JC, Brambilla, EM, Rohde, M, Göker, M, Gronow, S, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Klenk, HP, Kyrpides, NC

Publikováno v: Standards in Genomic Sciences, vol 4, iss 2

Riemerella anatipestifer (Hendrickson and Hilbert 1932) Segers et al. 1993 is the type species of the genus Riemerella, which belongs to the family Flavobacteriaceae. The species is of in-terest because of the position of the genus in the phylogeneti

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::0639baa4d3495382885486b3835249ec
https://escholarship.org/uc/item/7tb9b576