Correspondence on "Tracking Sources and Dissemination of Indicator Antibiotic Resistance Genes at a Watershed Scale". Be Aware of DNA Loss during Extraction from Water Samples!

Autor: Kirschner AKT; Medical University Vienna, Institute for Hygiene and Applied Immunology, Water Microbiology, Kinderspitalgasse 15, 1090 Vienna, Austria.; Karl Landsteiner University of Health Sciences, Division Water Quality & Health, Dr. Karl-Dorrek-Strasse 30, 3500 Krems, Austria.; Interuniversity Cooperation Centre Water & Health (www.waterandhealth.at)., Schachner-Groehs I; Medical University Vienna, Institute for Hygiene and Applied Immunology, Water Microbiology, Kinderspitalgasse 15, 1090 Vienna, Austria.; Karl Landsteiner University of Health Sciences, Division Water Quality & Health, Dr. Karl-Dorrek-Strasse 30, 3500 Krems, Austria., Linke RB; Interuniversity Cooperation Centre Water & Health (www.waterandhealth.at).; Technische Universität Wien, Institute of Chemical, Environmental and Bioscience Engineering, Research Group Microbiology and Molecular Diagnostics, 166/3/5, Gumpendorferstraße 1, 1040 Vienna, Austria., Farnleitner AH; Karl Landsteiner University of Health Sciences, Division Water Quality & Health, Dr. Karl-Dorrek-Strasse 30, 3500 Krems, Austria.; Interuniversity Cooperation Centre Water & Health (www.waterandhealth.at).; Technische Universität Wien, Institute of Chemical, Environmental and Bioscience Engineering, Research Group Microbiology and Molecular Diagnostics, 166/3/5, Gumpendorferstraße 1, 1040 Vienna, Austria.

Publikováno v: ACS ES&T water [ACS ES T Water] 2024 Sep 05; Vol. 4 (10), pp. 4658-4660. Date of Electronic Publication: 2024 Sep 05 (Print Publication: 2024).

Linking antibiotic resistance gene patterns with advanced faecal pollution assessment and environmental key parameters along 2300 km of the Danube River.

Autor: Schachner-Groehs I; Institute of Hygiene and Applied Immunology - Water Microbiology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Kinderspitalgasse 15, Vienna 1090, Austria., Koller M; Institute of Hygiene, Microbiology and Environmental Medicine, Medical University Graz, Neue Stiftingtalstraße 6, Graz 8010, Austria., Leopold M; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, Krems an der Donau 3500, Austria., Kolm C; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, Krems an der Donau 3500, Austria; Institute of Chemical, Environmental and Bioscience Engineering, Research Group Microbiology and Molecular Diagnostics, Technische Universität Wien, Gumpendorfer Straße 1A/166, Vienna 1060, Austria., Linke RB; Institute of Chemical, Environmental and Bioscience Engineering, Research Group Microbiology and Molecular Diagnostics, Technische Universität Wien, Gumpendorfer Straße 1A/166, Vienna 1060, Austria., Jakwerth S; Institute of Hygiene and Applied Immunology - Water Microbiology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Kinderspitalgasse 15, Vienna 1090, Austria., Kolarević S; Department of Hydroecology and Water Protection, Institute for Biological Research ¨Siniša Stanković¨, National Institute of the Republic of Serbia, University of Belgrade, Bulevar despota Stefana 142, Belgrade 11060, Serbia., Kračun-Kolarević M; Department of Hydroecology and Water Protection, Institute for Biological Research ¨Siniša Stanković¨, National Institute of the Republic of Serbia, University of Belgrade, Bulevar despota Stefana 142, Belgrade 11060, Serbia., Kandler W; Department of Agrotechnology (IFA-Tulln), Institute of Bioanalytics and Agro-Metabolomics, University of Natural Resources and Life Sciences, Konrad-Lorenz-Straße 20, Tulln an der Donau 3430, Austria., Sulyok M; Department of Agrotechnology (IFA-Tulln), Institute of Bioanalytics and Agro-Metabolomics, University of Natural Resources and Life Sciences, Konrad-Lorenz-Straße 20, Tulln an der Donau 3430, Austria., Vierheilig J; Institute of Water Quality and Resource Management, Technische Universität Wien, Karlsplatz 13/226-1, Wien 1040, Austria., Toumi M; Department of Microbiology, Eötvös Loránd University, Pázmány Péter sétány 1/C., H-1117, Budapest, Hungary., Farkas R; Department of Microbiology, Eötvös Loránd University, Pázmány Péter sétány 1/C., H-1117, Budapest, Hungary., Toth E; Department of Microbiology, Eötvös Loránd University, Pázmány Péter sétány 1/C., H-1117, Budapest, Hungary., Kittinger C; Institute of Hygiene, Microbiology and Environmental Medicine, Medical University Graz, Neue Stiftingtalstraße 6, Graz 8010, Austria., Zarfel G; Institute of Hygiene, Microbiology and Environmental Medicine, Medical University Graz, Neue Stiftingtalstraße 6, Graz 8010, Austria., Farnleitner AH; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, Krems an der Donau 3500, Austria; Institute of Chemical, Environmental and Bioscience Engineering, Research Group Microbiology and Molecular Diagnostics, Technische Universität Wien, Gumpendorfer Straße 1A/166, Vienna 1060, Austria. Electronic address: andreas.farnleitner@kl.ac.at., Kirschner AKT; Institute of Hygiene and Applied Immunology - Water Microbiology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Kinderspitalgasse 15, Vienna 1090, Austria; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, Krems an der Donau 3500, Austria. Electronic address: alexander.kirschner@meduniwien.ac.at.

Publikováno v: Water research [Water Res] 2024 Mar 15; Vol. 252, pp. 121244. Date of Electronic Publication: 2024 Jan 31.

Targeted Analysis of Cell-free Circulating Tumor DNA is Suitable for Early Relapse and Actionable Target Detection in Patients with Neuroblastoma.

Autor: Lodrini M; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Experimental and Clinical Research Center (ECRC) of the Charité and the Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany., Graef J; Department of Nuclear Medicine, Charité - Universitätsmedizin Berlin, Berlin, Germany., Thole-Kliesch TM; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany., Astrahantseff K; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany., Sprüssel A; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany., Grimaldi M; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Experimental and Clinical Research Center (ECRC) of the Charité and the Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany., Peitz C; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Experimental and Clinical Research Center (ECRC) of the Charité and the Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany., Linke RB; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Experimental and Clinical Research Center (ECRC) of the Charité and the Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany., Hollander JF; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Experimental and Clinical Research Center (ECRC) of the Charité and the Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany., Lankes E; Department of Pediatric Endocrinology and Diabetes, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Center for Chronically Sick Children, Charité - Universitätsmedizin Berlin, Berlin, Germany., Künkele A; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Berliner Institut für Gesundheitsforschung (BIH), Berlin, Germany., Oevermann L; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany., Schwabe G; Children's Hospital, Carl-Thiem-Klinikum, Cottbus, Germany., Fuchs J; Department of Pediatric Surgery and Pediatric Urology, University Children's Hospital, Eberhard-Karls-University Tuebingen, Tuebingen, Germany., Szymansky A; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany., Schulte JH; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Berliner Institut für Gesundheitsforschung (BIH), Berlin, Germany.; German Cancer Consortium (DKTK), partner site Berlin, Berlin, Germany.; German Cancer Research Center (DKFZ), Heidelberg, Germany., Hundsdörfer P; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Department of Pediatric Oncology, Helios Klinikum Berlin Buch, Berlin, Germany., Eckert C; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany., Amthauer H; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany., Eggert A; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Berliner Institut für Gesundheitsforschung (BIH), Berlin, Germany.; German Cancer Consortium (DKTK), partner site Berlin, Berlin, Germany.; German Cancer Research Center (DKFZ), Heidelberg, Germany., Deubzer HE; Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Berlin, Germany.; Experimental and Clinical Research Center (ECRC) of the Charité and the Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany.; Berliner Institut für Gesundheitsforschung (BIH), Berlin, Germany.; German Cancer Consortium (DKTK), partner site Berlin, Berlin, Germany.; German Cancer Research Center (DKFZ), Heidelberg, Germany.

Publikováno v: Clinical cancer research : an official journal of the American Association for Cancer Research [Clin Cancer Res] 2022 May 02; Vol. 28 (9), pp. 1809-1820.

Identifying Inorganic Turbidity in Water Samples as Potential Loss Factor During Nucleic Acid Extraction: Implications for Molecular Fecal Pollution Diagnostics and Source Tracking.

Autor: Linke RB; Research Group Environmental Microbiology and Molecular Diagnostics 166/5/3, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Vienna, Austria., Zeki S; Department of Marine Environment, Institute of Marine Sciences and Management, Istanbul University, Istanbul, Turkey., Mayer R; Research Group Environmental Microbiology and Molecular Diagnostics 166/5/3, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Vienna, Austria., Keiblinger K; Department of Forest and Soil Sciences, Institute of Soil Research, University of Natural Resources and Life Sciences Vienna, Vienna, Austria., Savio D; Research Group Environmental Microbiology and Molecular Diagnostics 166/5/3, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Vienna, Austria.; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Krems an der Donau, Austria., Kirschner AKT; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Krems an der Donau, Austria.; Institute for Hygiene and Applied Immunology, Medical University of Vienna, Vienna, Austria., Reischer GH; Research Group Environmental Microbiology and Molecular Diagnostics 166/5/3, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Vienna, Austria.; Research Area Molecular Diagnostics, Department IFA-Tulln, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Tulln, Austria., Mach RL; Research Division Biochemical Technology, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Vienna, Austria., Sommer R; Unit of Water Microbiology, Institute for Hygiene and Applied Immunology, Medical University of Vienna, Vienna, Austria., Farnleitner AH; Research Group Environmental Microbiology and Molecular Diagnostics 166/5/3, Institute of Chemical, Environmental and Bioscience Engineering, TU Wien, Vienna, Austria.; Division Water Quality and Health, Department Pharmacology, Physiology and Microbiology, Karl Landsteiner University of Health Sciences, Krems an der Donau, Austria.

Publikováno v: Frontiers in microbiology [Front Microbiol] 2021 Oct 20; Vol. 12, pp. 660566. Date of Electronic Publication: 2021 Oct 20 (Print Publication: 2021).

Assessing the faecal source sensitivity and specificity of ruminant and human genetic microbial source tracking markers in the central Ethiopian highlands.

Autor: Linke RB; Research Group of Environmental Microbiology and Molecular Diagnostics, Institute for Chemical, Biological and Environmental Engineering, Technical University Vienna, Vienna, Austria., Kebede G; Department of Biological Sciences, Ambo University, Ambo, Ethiopia.; Institute of Hydrobiology and Aquatic Ecosystem Management (IHG), University of Natural Resources and Life Sciences, Vienna, Austria., Mushi D; Department of Biosciences, Solomon Mahlangu College of Science and Education, Sokoine University of Agriculture, Morogoro, Tanzania., Lakew A; National Fishery and Aquatic Life Research Centre, Ethiopian Institute of Agricultural Research (EIAR), Sebeta, Ethiopia., Hayes DS; Institute of Hydrobiology and Aquatic Ecosystem Management (IHG), University of Natural Resources and Life Sciences, Vienna, Austria.; Centro de Estudos Florestais (CEF), Instituto Superior de Agronomia, University of Lisbon, Lisbon, Portugal., Graf W; Institute of Hydrobiology and Aquatic Ecosystem Management (IHG), University of Natural Resources and Life Sciences, Vienna, Austria., Farnleitner AH; Research Group of Environmental Microbiology and Molecular Diagnostics, Institute for Chemical, Biological and Environmental Engineering, Technical University Vienna, Vienna, Austria.; Research Division Water Quality and Health, Karl Landsteiner University for Health Sciences, Krems, Austria.

Publikováno v: Letters in applied microbiology [Lett Appl Microbiol] 2021 Apr; Vol. 72 (4), pp. 458-466. Date of Electronic Publication: 2020 Dec 24.