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Akademický článek

Changes in Gut Microbiota of Patients with Atopic Dermatitis During Balneotherapy

Autor: Thirion F, Guilly S, Fromentin S, Plaza Oñate F, Alvarez AS, Le Chatelier E, Pons N, Levenez F, Quinquis B, Ehrlich S, Doré J, Martin R, Seité S

Publikováno v: Clinical, Cosmetic and Investigational Dermatology, Vol Volume 15, Pp 163-176 (2022)

Florence Thirion,1,* Susie Guilly,1,* Sébastien Fromentin,1 Florian Plaza Oñate,1 Anne-Sophie Alvarez,1 Emmanuelle Le Chatelier,1 Nicolas Pons,1 Florence Levenez,1 Benoît Quinquis,1 Stanislav Ehrlich,1 Joel Doré,1,2 Richard Martin,3 Sophi

Externí odkaz: https://doaj.org/article/c6750ec2414f4623ab71b1465c536cfe

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Akademický článek

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Combinatorial, additive and dose-dependent drug-microbiome associations

Autor: Forslund, SK, Chakaroun, R, Zimmermann-Kogadeeva, M, Markó, L, Aron-Wisnewsky, J, Nielsen, T, Moitinho-Silva, L, Schmidt, TSB, Falony, G, Vieira-Silva, S, Adriouch, S, Alves, RJ, Assmann, K, Bastard, J-P, Birkner, T, Caesar, R, Chilloux, J, Coelho, LP, Fezeu, L, Galleron, N, Helft, G, Isnard, R, Ji, B, Kuhn, M, Le Chatelier, E, Myridakis, A, Olsson, L, Pons, N, Prifti, E, Quinquis, B, Roume, H, Salem, J-E, Sokolovska, N, Tremaroli, V, Valles-Colomer, M, Lewinter, C, Søndertoft, NB, Pedersen, HK, Hansen, TH, Amouyal, C, Andersson Galijatovic, EA, Andreelli, F, Barthelemy, O, Batisse, J-P, Belda, E, Berland, M, Bittar, R, Blottière, H, Bosquet, F, Boubrit, R, Bourron, O, Camus, M, Cassuto, D, Ciangura, C, Collet, J-P, Dao, M-C, Djebbar, M, Doré, A, Engelbrechtsen, L, Fellahi, S, Fromentin, S, Galan, P, Gauguier, D, Giral, P, Hartemann, A, Hartmann, B, Holst, JJ, Hornbak, M, Hoyles, L, Hulot, J-S, Jaqueminet, S, Jørgensen, NR, Julienne, H, Justesen, J, Kammer, J, Krarup, N, Kerneis, M, Khemis, J, Kozlowski, R, Lejard, V, Levenez, F, Lucas-Martini, L, Massey, R, Martinez-Gili, L, Maziers, N, Medina-Stamminger, J, Montalescot, G, Moute, S, Neves, AL, Olanipekun, M, Le Pavin, LP, Poitou, C, Pousset, F, Pouzoulet, L, Rodriguez-Martinez, A, Rouault, C, Silvain, J, Svendstrup, M, Swartz, T, Vanduyvenboden, T, Vatier, C, Walther, S, Gøtze, JP, Køber, L, Vestergaard, H, Hansen, T, Zucker, J-D, Hercberg, S, Oppert, J-M, Letunic, I, Nielsen, J, Bäckhed, F, Ehrlich, SD, Dumas, M-E, Raes, J, Pedersen, O, Clément, K, Stumvoll, M, Bork, P, The MetaCardis Consortium (Hoyles, L.)

Publikováno v: Nature
Nature, 2021, 600 (7889), pp.500-505. ⟨10.1038/s41586-021-04177-9⟩

During the transition from a healthy state to cardiometabolic disease, patients become heavily medicated, which leads to an increasingly aberrant gut microbiome and serum metabolome, and complicates biomarker discovery1-5. Here, through integrated mu

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7d63d45a4e7d6e8c270f49c7d2bf0ce1
http://edoc.mdc-berlin.de/21160/1/21160oa.pdf

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Gut microbiota profile of obese diabetic women submitted to roux-en-y gastric bypass and its association with food intake and postoperative diabetes remission

Gut microbiota composition is influenced by environmental factors and has been shown to impact body metabolism. Objective: To assess the gut microbiota profile before and after Roux-en-Y gastric bypass (RYGB) and the correlation with food intake and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______932::cb11f4fd8e057dca77481f4cca2a24cd
http://www.documentation.ird.fr/hor/fdi:010078935

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Akademický článek

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Akademický článek

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Akademický článek

The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age

Autor: Mariat D, Firmesse O, Levenez F, Guimarăes VD, Sokol H, Doré J, Corthier G, Furet J-P

Publikováno v: BMC Microbiology, Vol 9, Iss 1, p 123 (2009)

Abstract Background In humans, the intestinal microbiota plays an important role in the maintenance of host health by providing energy, nutrients, and immunological protection. Applying current molecular methods is necessary to surmount the limitatio

Externí odkaz: https://doaj.org/article/5c161de58309465ab1c84671e0e91731

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Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

Autor: Nielsen, H.B., Almeida, M., Sierakowska Juncker, A., Rasmussen, S., Li, J., Sunagawa, S., Plichta, D.R., Gautier, L., Pedersen, A.G., Le Chatelier, E., Pelletier, E., Bonde, I., Nielsen, T., Manichanh, C., Arumugam, M., Batto, J.M., Quintanilha dos Santos, M.B., Blom, N., Borruel, N., Burgdorf, K.S., Boumezbeur, F., Casellas, F., Doré, J., Dworzynski, P., Guarner, F., Hansen, T., Hildebrand, F., Kaas, R.S., Kennedy, S., Kristiansen, K., Kultima, J.R., Leonard, P., Levenez, F., Lund, O., Moumen, B., Le Paslier, D., Pons, N., Pedersen, O., Prifti, E., Qin, J., Raes, J., Sørensen, S., Tap, J., Tims, S., Ussery, D.W., Yamada, T., Jamet, A., Mérieux, A., Cultrone, A., Torrejon, A., Quinquis, B., Brechot, C., Delorme, C., M'Rini, C., de Vos, W.M., Maguin, E., Varela, E., Guedon, E., Gwen, F., Haimet, F., Artiguenave, F., Vandemeulebrouck, G., Denariaz, G., Khaci, G., Blottière, H., Knol, J., Weissenbach, J., van Hylckama Vlieg, J.E., Torben, J., Parkhil, J., Turner, K., van de Guchte, M., Antolin, M., Rescigno, M., Kleerebezem, M., Derrien, M., Galleron, N., Sanchez, N., Grarup, N., Veiga, P., Oozeer, R., Dervyn, R., Layec, S., Bruls, T., Winogradski, Y., Zoetendal, E.G., Renault, D., Sicheritz-Ponten, Bork, P., Wang, J., Brunak, S., Ehrlich, S.D.

Publikováno v: Nature Biotechnology
Nature Biotechnology, Nature Publishing Group, 2014, 32, pp.822-828. ⟨10.1038/nbt.2939⟩
Nature Biotechnology, 2014, 32, pp.822-828. ⟨10.1038/nbt.2939⟩
Nature Biotechnology, Nature Publishing Group, 2014, 32 (8), pp.822-828. ⟨10.1038/nbt.2939⟩
Nature Biotechnology 32 (2014)
Nature Biotechnology, 32, 822-828
Nielsen, H B, Almeida, M, Juncker, A S, Rasmussen, S, Li, J H, Sunagawa, S, Plichta, D R, Gautier, L, Pedersen, A G, Le Chatelier, E, Pelletier, E, Bonde, I, Nielsen, T, Manichanh, C, Arumugam, M, Batto, J M, dos Santos, M B Q, Blom, N, Borruel, N, Burgdorf, K S, Boumezbeur, F, Casellas, F, Dore, J, Dworzynski, P, Guarner, F, Hansen, T, Hildebrand, F, Kaas, R S, Kennedy, S, Kristiansen, K, Kultima, J R, Leonard, P, Levenez, F, Lund, O, Moumen, B, Le Paslier, D, Pons, N, Pedersen, O, Prifti, E, Qin, J J, Raes, J, Sorensen, S, Tap, J, Tims, S, Ussery, D W, Yamada, T, Renault, P, Sicheritz-Ponten, T, Bork, P, Wang, J, Brunak, S, Ehrlich, S D & Meta, H I T C 2014, ' Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes ', Nature Biotechnology, vol. 32, no. 8, pp. 822-828 . https://doi.org/10.1038/nbt.2939

Most current approaches for analyzing metagenomic data rely on comparisons to reference genomes, but the microbial diversity of many environments extends far beyond what is covered by reference databases. De novo segregation of complex metagenomic da

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::121e69b6466f2fc83a6a9b77a47c9d05
https://doi.org/10.1038/nbt.2939

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