Compost, plants and endophytes versus metal contamination: choice of a restoration strategy steers the microbiome in polymetallic mine waste.

Autor: Kracmarova-Farren M; Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Technicka 3, 166 28, Prague 6, Czech Republic., Papik J; Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Technicka 3, 166 28, Prague 6, Czech Republic. jakub.papik@vscht.cz., Uhlik O; Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Technicka 3, 166 28, Prague 6, Czech Republic., Freeman J; Intrinsyx Environmental, Sunnyvale, CA, 94085, USA., Foster A; U.S. Geological Survey, Menlo Park, CA, USA., Leewis MC; U.S. Geological Survey, Menlo Park, CA, USA.; Agriculture and Agri-Food Canada, Quebec Research and Development Centre, Quebec, QC, Canada., Creamer C; U.S. Geological Survey, Menlo Park, CA, USA.

Publikováno v: Environmental microbiome [Environ Microbiome] 2023 Oct 07; Vol. 18 (1), pp. 74. Date of Electronic Publication: 2023 Oct 07.

Legacy Effects of Phytoremediation on Plant-Associated Prokaryotic Communities in Remediated Subarctic Soil Historically Contaminated with Petroleum Hydrocarbons.

Autor: Papik J; University of Chemistry, and Technology, Prague, Faculty of Food and Biochemical Technology, Department of Biochemistry and Microbiology, Prague, Czech Republic., Strejcek M; University of Chemistry, and Technology, Prague, Faculty of Food and Biochemical Technology, Department of Biochemistry and Microbiology, Prague, Czech Republic., Musilova L; University of Chemistry, and Technology, Prague, Faculty of Food and Biochemical Technology, Department of Biochemistry and Microbiology, Prague, Czech Republic., Guritz R; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, Alaska, USA.; Department of Biology and Wildlife, University of Alaska Fairbanks, Fairbanks, Alaska, USA., Leewis MC; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, Alaska, USA.; Department of Biology and Wildlife, University of Alaska Fairbanks, Fairbanks, Alaska, USA.; Agriculture and Agri-Food Canada, Quebec, Quebec, Canada., Leigh MB; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, Alaska, USA.; Department of Biology and Wildlife, University of Alaska Fairbanks, Fairbanks, Alaska, USA., Uhlik O; University of Chemistry, and Technology, Prague, Faculty of Food and Biochemical Technology, Department of Biochemistry and Microbiology, Prague, Czech Republic.

Publikováno v: Microbiology spectrum [Microbiol Spectr] 2023 Mar 28, pp. e0444822. Date of Electronic Publication: 2023 Mar 28.

Microbiome assembly in thawing permafrost and its feedbacks to climate.

Autor: Ernakovich JG; Natural Resources and the Environment, University of New Hampshire, Durham, New Hampshire, USA.; Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; EMergent Ecosystem Response to ChanGE (EMERGE) Biology Integration Institute., Barbato RA; U.S. Army Cold Regions Research and Engineering Laboratory, Hanover, New Hampshire, USA., Rich VI; EMergent Ecosystem Response to ChanGE (EMERGE) Biology Integration Institute.; Microbiology Department, Ohio State University, Columbus, Ohio, USA.; Byrd Polar and Climate Research Center, Ohio State University, Colombus, Ohio, USA.; Center of Microbiome Science, Ohio State University, Colombus, Ohio, USA., Schädel C; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USA., Hewitt RE; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USA.; Department of Environmental Studies, Amherst College, Amherst, Massachusetts, USA., Doherty SJ; Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.; U.S. Army Cold Regions Research and Engineering Laboratory, Hanover, New Hampshire, USA., Whalen ED; Natural Resources and the Environment, University of New Hampshire, Durham, New Hampshire, USA., Abbott BW; Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA., Barta J; Centre for Polar Ecology, University of South Bohemia, Ceske Budejovice, Czech Republic., Biasi C; Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland., Chabot CL; California State University Northridge, Northridge, California, USA., Hultman J; Natural Resources Institute Finland, Helsinki, Finland., Knoblauch C; Institute of Soil Science, Universität Hamburg, Hamburg, Germany.; Center for Earth System Research and Sustainability, Universität Hamburg, Hamburg, Germany., Vetter MCYL; Department of Geosciences, Princeton University, Princeton, New Jersey, USA.; Laboratory of Extraterrestrial Ocean Systems (LEOS), Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, China., Leewis MC; U.S. Geological Survey, Geology, Minerals, Energy and Geophysics Science Center, Menlo Park, California, USA.; Agriculture and Agri-Food Canada, Quebec Research and Development Centre, Quebec, Quebec, Canada., Liebner S; GFZ German Research Centre for Geosciences, Section Geomicrobiology, Potsdam, Germany., Mackelprang R; California State University Northridge, Northridge, California, USA., Onstott TC; Department of Geosciences, Princeton University, Princeton, New Jersey, USA., Richter A; Centre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.; Austrian Polar Research Institute, Vienna, Austria., Schütte UME; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, Alaska, USA., Siljanen HMP; Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland., Taş N; Lawrence Berkeley National Laboratory, Berkeley, California, USA., Timling I; University of Alaska, Fairbanks, Alaska, USA., Vishnivetskaya TA; University of Tennessee, Knoxville, Tennessee, USA.; Institute of Physicochemical and Biological Problems of Soil Science, Pushchino, Russia., Waldrop MP; U.S. Geological Survey, Geology, Minerals, Energy and Geophysics Science Center, Menlo Park, California, USA., Winkel M; GFZ German Research Centre for Geosciences, Interface Geochemistry, Potsdam, Germany.; BfR Federal Institute for Risk Assessment, Berlin, Germany.

Publikováno v: Global change biology [Glob Chang Biol] 2022 Sep; Vol. 28 (17), pp. 5007-5026. Date of Electronic Publication: 2022 Jun 20.

Low O 2 level enhances CH 4 -derived carbon flow into microbial communities in landfill cover soils.

Autor: He R; Zhejiang Provincial Key Laboratory of Solid Waste Treatment and Recycling, School of Environmental Science and Engineering, Zhejiang Gongshang University, Hangzhou, 310012, China; Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China. Electronic address: heruo@zju.edu.cn., Su Y; Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China; Institute of Environment, Resource, Soil and Fertilizer, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China., Leewis MC; Institute of Arctic Biology, University of Alaska Fairbanks, Alaska, 99775, USA; US Geological Survey, Menlo Park, CA, 94025, USA., Chu YX; Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China., Wang J; Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China., Ma RC; Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China., Wu D; Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China., Zhan LT; MOE Key Laboratory of Soft Soils and Geoenvironmental Engineering, Zhejiang University, Hangzhou, 310058, China., Herriott IC; Institute of Arctic Biology, University of Alaska Fairbanks, Alaska, 99775, USA., Leigh MB; Institute of Arctic Biology, University of Alaska Fairbanks, Alaska, 99775, USA.

Publikováno v: Environmental pollution (Barking, Essex : 1987) [Environ Pollut] 2020 Mar; Vol. 258, pp. 113676. Date of Electronic Publication: 2019 Nov 27.

Methane- and dissolved organic carbon-fueled microbial loop supports a tropical subterranean estuary ecosystem.

Autor: Brankovits D; Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX, 77553, USA. david.brankovits@gmail.com., Pohlman JW; Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX, 77553, USA. jpohlman@usgs.gov.; U.S. Geological Survey, Woods Hole Coastal and Marine Science Center, Woods Hole, MA, 02543, USA. jpohlman@usgs.gov., Niemann H; Department of Environmental Sciences, University of Basel, Basel, 4056, Switzerland.; Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, 1790 AB, Den Burg, Netherlands.; Centre for Arctic Gas Hydrate (CAGE), 9037, Tromsø, Norway., Leigh MB; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, AK, 99775, USA., Leewis MC; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, AK, 99775, USA.; U.S. Geological Survey, GMEG Science Center, Menlo Park, CA, 94025, USA., Becker KW; Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, 02543, USA., Iliffe TM; Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX, 77553, USA., Alvarez F; Institute of Biology, National Autonomous University of Mexico (UNAM), 04510, Mexico, D.F., Mexico., Lehmann MF; Department of Environmental Sciences, University of Basel, Basel, 4056, Switzerland., Phillips B; Speleotech, Tulum, 77780, Quintana Roo, Mexico.

Publikováno v: Nature communications [Nat Commun] 2017 Nov 28; Vol. 8 (1), pp. 1835. Date of Electronic Publication: 2017 Nov 28.