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EMERGEN-DB : The French database for SARS-CoV-2 genomic surveillance and research

Autor: Messak, Imane, Mohamed, Anliat, Antoinat, Chriara, Le Bars, Arthur, Tonazzolli, Arianna, Demaille, Benjamin, Sand, Olivier, Gerbes, François, Rosnet, Thomas, Bouri, Laurent, Seiler, Julien, Charrière, Nicole, Antoniewski, Christophe, Bozorgan, Anne, Castro Alvarez, Javier, Sudour, Jeanne, Le Strat, Yann, Coignard, Bruno, Amzert, Abdelkader, Gharbi, Nebras, Lethimonier, Franck, Chiapello, Hélène, Naouar, Naira, Médigue, Claudine, Le Corguillé, Gildas, Salgado, David, van Helden, Jacques, Denecker, Thomas

In January 2021, the French Ministries of Health (MSS) and Research (MESRI) launched EMERGEN, a national plan for SARS-CoV-2 genomic surveillance, which aims at monitoring the evolution of the COVID-19 in France, detecting new variants and supporting

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::282a8add1acf5b746b1a5009befd8846

Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems.

Autor: Denoeud F; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Godfroy O; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Cruaud C; Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry 91057, France., Heesch S; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Nehr Z; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Tadrent N; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Couloux A; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Brillet-Guéguen L; CNRS, UMR 8227, Laboratory of Integrative Biology of Marine Models, Sorbonne Université, Station Biologique de Roscoff, Roscoff, France; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., Delage L; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Mckeown D; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., Motomura T; Muroran Marine Station, Hokkaido University, Muroran, Japan., Sussfeld D; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France; Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205, Sorbonne Université, CNRS, Museum, Paris, France., Fan X; State Key Laboratory of Mariculture Biobreeding and Sustainable Goods, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, Shandong 266071, China; Laboratory for Marine Fisheries Science and Food Production Processes, Laoshan Laboratory, Qingdao, Shandong 266237, China., Mazéas L; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Terrapon N; Aix Marseille University, CNRS, UMR 7257 AFMB, Marseille, France; INRAE, USC 1408 AFMB, Marseille, France., Barrera-Redondo J; Department of Algal Development and Evolution, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany., Petroll R; Department of Algal Development and Evolution, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany., Reynes L; IRL 3614, UMR 7144, DISEEM, CNRS, Sorbonne Université, Station Biologique de Roscoff, Roscoff 29688, France., Choi SW; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Republic of Korea., Jo J; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Republic of Korea., Uthanumallian K; University of Melbourne, Parkville, VIC, Australia., Bogaert K; Phycology Research Group, Ghent University, Krijgslaan 281 S8, 9000 Ghent, Belgium., Duc C; Nantes Université, CNRS, US2B, UMR 6286, 44000 Nantes, France., Ratchinski P; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Lipinska A; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France; Department of Algal Development and Evolution, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany., Noel B; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Murphy EA; University of Bristol, Bristol, UK; Marine Biological Association, Plymouth, UK., Lohr M; Johannes Gutenberg University, Mainz, Germany., Khatei A; Algal and Microbial Biotechnology Division, Nord University, Bodø, Norway., Hamon-Giraud P; University of Rennes, Inria, CNRS, IRISA, Equipe Dyliss, Rennes, France., Vieira C; Research Institute for Basic Sciences, Jeju National University, Jeju 63243, Republic of Korea., Avia K; INRAE, Université de Strasbourg, UMR SVQV, 68000 Colmar, France., Akerfors SS; Johannes Gutenberg University, Mainz, Germany., Akita S; Faculty of Fisheries Sciences, Hokkaido University, Minato-cho 3-1-1, Hakodate, Hokkaido 041-8611, Japan., Badis Y; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Barbeyron T; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Belcour A; University of Rennes, Inria, CNRS, IRISA, Equipe Dyliss, Rennes, France., Berrabah W; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Blanquart S; University of Rennes, Inria, CNRS, IRISA, Equipe Dyliss, Rennes, France., Bouguerba-Collin A; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Bringloe T; University of Melbourne, Parkville, VIC, Australia., Cattolico RA; University of Washington, Seattle, WA, USA., Cormier A; Ifremer, IRSI, SeBiMER Service de Bioinformatique de l'Ifremer, 29280 Plouzané, France., Cruz de Carvalho H; Institut de Biologie de l'ENS (IBENS), Département de Biologie, École normale supérieure, CNRS, INSERM, Université PSL, 75005 Paris, France; Université Paris Est-Créteil (UPEC), Faculté des Sciences et Technologie, 61, Avenue du Général De Gaulle, 94000 Créteil, France., Dallet R; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., De Clerck O; Phycology Research Group, Ghent University, Krijgslaan 281 S8, 9000 Ghent, Belgium., Debit A; Institut de Biologie de l'ENS (IBENS), Département de Biologie, École normale supérieure, CNRS, INSERM, Université PSL, 75005 Paris, France., Denis E; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Destombe C; IRL 3614, UMR 7144, DISEEM, CNRS, Sorbonne Université, Station Biologique de Roscoff, Roscoff 29688, France., Dinatale E; Department of Algal Development and Evolution, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany., Dittami S; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Drula E; Aix Marseille University, CNRS, UMR 7257 AFMB, Marseille, France; INRAE, USC 1408 AFMB, Marseille, France., Faugeron S; Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile., Got J; University of Rennes, Inria, CNRS, IRISA, Equipe Dyliss, Rennes, France., Graf L; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Republic of Korea., Groisillier A; Nantes Université, CNRS, US2B, UMR 6286, 44000 Nantes, France., Guillemin ML; IRL 3614, UMR 7144, DISEEM, CNRS, Sorbonne Université, Station Biologique de Roscoff, Roscoff 29688, France; Núcleo Milenio MASH, Instituto de Ciencias Ambientales y Evolutivas, Facultad de Ciencias, Universidad Austral de Chile, Valdivia, Chile; Centro FONDAP de Investigación en Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Valdivia, Chile., Harms L; Alfred Wegener Institute (AWI), Bremenhaven, Germany., Hatchett WJ; Nord University, Bodø, Norway., Henrissat B; Department of Biotechnology and Biomedicine, Technical University of Denmark, Kgs Lyngby, Denmark., Hoarau G; Nord University, Bodø, Norway., Jollivet C; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Jueterbock A; Algal and Microbial Biotechnology Division, Nord University, Bodø, Norway., Kayal E; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., Knoll AH; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA., Kogame K; Biological Sciences, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan., Le Bars A; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France; CNRS, Institut Français de Bioinformatique, IFB-core, Évry, France., Leblanc C; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Le Gall L; Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205, Sorbonne Université, CNRS, Museum, Paris, France., Ley R; Johannes Gutenberg University, Mainz, Germany., Liu X; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., LoDuca ST; Department of Geography and Geology, Eastern Michigan University, Ypsilanti, MI 48197, USA., Lopez PJ; Centre National de la Recherche Scientifique, UMR BOREA MNHN/CNRS-8067/SU/IRD/Université de Caen Normandie/Université des Antilles, Plouzané, France., Lopez P; Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205, Sorbonne Université, CNRS, Museum, Paris, France., Manirakiza E; Nantes Université, CNRS, US2B, UMR 6286, 44000 Nantes, France., Massau K; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., Mauger S; IRL 3614, UMR 7144, DISEEM, CNRS, Sorbonne Université, Station Biologique de Roscoff, Roscoff 29688, France., Mest L; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Michel G; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Monteiro C; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Nagasato C; Muroran Marine Station, Hokkaido University, Muroran, Japan., Nègre D; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France., Pelletier E; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France., Phillips N; Biology Department, Arcadia University, Glenside, PA, USA., Potin P; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Rensing SA; University of Freiburg, Freiburg im Breisgau, Germany., Rousselot E; Nantes Université, CNRS, US2B, UMR 6286, 44000 Nantes, France., Rousvoal S; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Schroeder D; University of Minnesota, St. Paul, MN, USA., Scornet D; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France., Siegel A; University of Rennes, Inria, CNRS, IRISA, Equipe Dyliss, Rennes, France., Tirichine L; Nantes Université, CNRS, US2B, UMR 6286, 44000 Nantes, France., Tonon T; Centre for Novel Agricultural Products (CNAP), Department of Biology, University of York, Heslington, York YO10 5DD, UK., Valentin K; Alfred Wegener Institute (AWI), Bremenhaven, Germany., Verbruggen H; University of Melbourne, Parkville, VIC, Australia., Weinberger F; GEOMAR Helmholtz Centre for Ocean Research, Kiel, Germany., Wheeler G; Marine Biological Association, Plymouth, UK., Kawai H; Kobe University Research Center for Inland Seas, Kobe, Japan. Electronic address: kawai@kobe-u.ac.jp., Peters AF; Bezhin Rosko, 29250 Santec, France. Electronic address: akirapeters@gmail.com., Yoon HS; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Republic of Korea. Electronic address: hsyoon2011@skku.edu., Hervé C; Sorbonne Université, CNRS, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France. Electronic address: cherve@sb-roscoff.fr., Ye N; State Key Laboratory of Mariculture Biobreeding and Sustainable Goods, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, Shandong 266071, China; Laboratory for Marine Fisheries Science and Food Production Processes, Laoshan Laboratory, Qingdao, Shandong 266237, China. Electronic address: yenh@ysfri.ac.cn., Bapteste E; Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205, Sorbonne Université, CNRS, Museum, Paris, France. Electronic address: epbapteste@gmail.com., Valero M; IRL 3614, UMR 7144, DISEEM, CNRS, Sorbonne Université, Station Biologique de Roscoff, Roscoff 29688, France. Electronic address: valero@sb-roscoff.fr., Markov GV; Sorbonne Université, CNRS, UMR 8227, ABIE Team, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France. Electronic address: gabriel.markov@sb-roscoff.fr., Corre E; CNRS, Sorbonne Université, FR2424, ABiMS-IFB, Station Biologique, Roscoff, France. Electronic address: corre@sb-roscoff.fr., Coelho SM; Department of Algal Development and Evolution, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany. Electronic address: susana.coelho@tuebingen.mpg.de., Wincker P; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France. Electronic address: pwincker@genoscope.cns.fr., Aury JM; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry 91057, France. Electronic address: jmaury@genoscope.cns.fr., Cock JM; Sorbonne Université, CNRS, Algal Genetics Group, Integrative Biology of Marine Models Laboratory, Station Biologique de Roscoff, Roscoff, France. Electronic address: cock@sb-roscoff.fr.

Publikováno v: Cell [Cell] 2024 Nov 18. Date of Electronic Publication: 2024 Nov 18.