Zobrazeno 1 - 10
of 28
pro vyhledávání: '"Laura Sandor"'
Autor:
Sebastian Theobald, Tammi C. Vesth, Elena Geib, Jane L. Nybo, Jens C. Frisvad, Thomas O. Larsen, Alan Kuo, Kurt LaButti, Ellen K. Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S. Kun, Ana Carolina dos Santos Gomes, Bernard Henrissat, Jon K. Magnuson, Blake A. Simmons, Miia R. Mäkelä, Uffe H. Mortensen, Igor V. Grigoriev, Matthias Brock, Scott E. Baker, Ronald P. de Vries, Mikael R. Andersen
Publikováno v:
Journal of Fungi, Vol 10, Iss 7, p 507 (2024)
Aspergillus terreus has attracted interest due to its application in industrial biotechnology, particularly for the production of itaconic acid and bioactive secondary metabolites. As related species also seem to possess a prosperous secondary metabo
Externí odkaz:
https://doaj.org/article/965e40567a17419182833c65476fe7d3
Autor:
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry Jenkins, Bangjun Zhou, J. Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Chris Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan O’Malley, Chi Zhang, Katrien M. Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, James C. Schnable
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-20 (2022)
Paspalum vaginatum is a stress tolerant wild relative of maize and sorghum. Here, the authors assemble its genome at pseudomolecule level and reveal the role of trehalose mediated autophagy in increasing maize biomass productivity under nutrient-defi
Externí odkaz:
https://doaj.org/article/6ee641227d8a49c0877b2e057d75b3e1
Autor:
Marc W. Van Goethem, Andrew R. Osborn, Benjamin P. Bowen, Peter F. Andeer, Tami L. Swenson, Alicia Clum, Robert Riley, Guifen He, Maxim Koriabine, Laura Sandor, Mi Yan, Chris G. Daum, Yuko Yoshinaga, Thulani P. Makhalanyane, Ferran Garcia-Pichel, Axel Visel, Len A. Pennacchio, Ronan C. O’Malley, Trent R. Northen
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-10 (2021)
Marc Van Goethem et al. combine short- and long-read sequencing from biocrust samples to report nearly 3,000 biosynthetic gene clusters (BGCs) encoding microbial secondary metabolites. Their results demonstrate the advantage of integrated metatranscr
Externí odkaz:
https://doaj.org/article/eae224afa2b747cc9f684dcc3d7db239
Autor:
Ying Chang, D’Ann Rochon, Satoshi Sekimoto, Yan Wang, Mansi Chovatia, Laura Sandor, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)
Abstract The zoosporic obligate endoparasites, Olpidium, hold a pivotal position to the reconstruction of the flagellum loss in fungi, one of the key morphological transitions associated with the colonization of land by the early fungi. We generated
Externí odkaz:
https://doaj.org/article/43da8aae83df4773810b0787d298573f
Autor:
Ran Zhou, David Macaya-Sanz, Craig H. Carlson, Jeremy Schmutz, Jerry W. Jenkins, David Kudrna, Aditi Sharma, Laura Sandor, Shengqiang Shu, Kerrie Barry, Gerald A. Tuskan, Tao Ma, Jianquan Liu, Matthew Olson, Lawrence B. Smart, Stephen P. DiFazio
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
Abstract Background Sex chromosomes have arisen independently in a wide variety of species, yet they share common characteristics, including the presence of suppressed recombination surrounding sex determination loci. Mammalian sex chromosomes contai
Externí odkaz:
https://doaj.org/article/169c9faeed7245b69975a469f11e9b1d
Autor:
Audrey P Gasch, Feiqiao Brian Yu, James Hose, Leah E Escalante, Mike Place, Rhonda Bacher, Jad Kanbar, Doina Ciobanu, Laura Sandor, Igor V Grigoriev, Christina Kendziorski, Stephen R Quake, Megan N McClean
Publikováno v:
PLoS Biology, Vol 15, Iss 12, p e2004050 (2017)
From bacteria to humans, individual cells within isogenic populations can show significant variation in stress tolerance, but the nature of this heterogeneity is not clear. To investigate this, we used single-cell RNA sequencing to quantify transcrip
Externí odkaz:
https://doaj.org/article/51d8d3ea4fa0474dbdc545da373ef4c2
Autor:
Sean Sierra-Patev, Byoungnam Min, Miguel Naranjo-Ortiz, Brian Looney, Zachary Konkel, Jason C. Slot, Yuichi Sakamoto, Jacob L. Steenwyk, Antonis Rokas, Juan Carro, Susana Camarero, Patricia Ferreira, Gonzalo Molpeceres, Francisco J. Ruiz-Dueñas, Ana Serrano, Bernard Henrissat, Elodie Drula, Karen W. Hughes, Juan L. Mata, Noemia Kazue Ishikawa, Ruby Vargas-Isla, Shuji Ushijima, Chris A. Smith, John Donoghue, Steven Ahrendt, William Andreopoulos, Guifen He, Kurt LaButti, Anna Lipzen, Vivian Ng, Robert Riley, Laura Sandor, Kerrie Barry, Angel T. Martínez, Yang Xiao, John G. Gibbons, Kazuhisa Terashima, Igor V. Grigoriev, David Hibbett
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (10), pp.e2214076120. ⟨10.1073/pnas.2214076120⟩
Sierra-Patev, S, Min, B, Naranjo-Ortiz, M, Looney, B, Konkel, Z, Slot, J C, Sakamoto, Y, Steenwyk, J L, Rokas, A, Carro, J, Camarero, S, Ferreira, P, Molpeceres, G, Ruiz-Dueñas, F J, Serrano, A, Henrissat, B, Drula, E, Hughes, K W, Mata, J L, Ishikawa, N K, Vargas-Isla, R, Ushijima, S, Smith, C A, Donoghue, J, Ahrendt, S, Andreopoulos, W, He, G, LaButti, K, Lipzen, A, Ng, V, Riley, R, Sandor, L, Barry, K, Martínez, A T, Xiao, Y, Gibbons, J G, Terashima, K, Grigoriev, I V & Hibbett, D 2023, ' A global phylogenomic analysis of the shiitake genus Lentinula ', Proceedings of the National Academy of Sciences of the United States of America, vol. 120, no. 10, e2214076120 . https://doi.org/10.1073/pnas.2214076120
Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (10), pp.e2214076120. ⟨10.1073/pnas.2214076120⟩
Sierra-Patev, S, Min, B, Naranjo-Ortiz, M, Looney, B, Konkel, Z, Slot, J C, Sakamoto, Y, Steenwyk, J L, Rokas, A, Carro, J, Camarero, S, Ferreira, P, Molpeceres, G, Ruiz-Dueñas, F J, Serrano, A, Henrissat, B, Drula, E, Hughes, K W, Mata, J L, Ishikawa, N K, Vargas-Isla, R, Ushijima, S, Smith, C A, Donoghue, J, Ahrendt, S, Andreopoulos, W, He, G, LaButti, K, Lipzen, A, Ng, V, Riley, R, Sandor, L, Barry, K, Martínez, A T, Xiao, Y, Gibbons, J G, Terashima, K, Grigoriev, I V & Hibbett, D 2023, ' A global phylogenomic analysis of the shiitake genus Lentinula ', Proceedings of the National Academy of Sciences of the United States of America, vol. 120, no. 10, e2214076120 . https://doi.org/10.1073/pnas.2214076120
10 p.-6 fig.
Lentinula is a broadly distributed group of fungi that contains the cultivated shiitake mushroom, L. edodes. We sequenced 24 genomes representing eight described species and several unnamed lineages of Lentinula from 15 countries on
Lentinula is a broadly distributed group of fungi that contains the cultivated shiitake mushroom, L. edodes. We sequenced 24 genomes representing eight described species and several unnamed lineages of Lentinula from 15 countries on
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::75bfdfa962c5630641f49f427a5674cc
http://hdl.handle.net/10261/296641
http://hdl.handle.net/10261/296641
Autor:
Trent R. Northen, Andrew R. Osborn, Len A. Pennacchio, Yuko Yoshinaga, Marc W. Van Goethem, Axel Visel, Thulani P. Makhalanyane, Tami L. Swenson, Benjamin P. Bowen, Alicia Clum, Mi Yan, Guifen He, Chris Daum, Ronan C. O'Malley, Maxim Koriabine, Laura Sandor, Ferran Garcia-Pichel, Robert Riley, Peter F. Andeer
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-10 (2021)
Communications biology, vol 4, iss 1
Communications Biology
Communications biology, vol 4, iss 1
Communications Biology
Microbial biosynthetic gene clusters (BGCs) encoding secondary metabolites are thought to impact a plethora of biologically mediated environmental processes, yet their discovery and functional characterization in natural microbiomes remains challengi
Autor:
Ying Chang, Yan Wang, Stephen Mondo, Steven Ahrendt, William Andreopoulos, Kerrie Barry, Jeff Beard, Gerald L. Benny, Sabrina Blankenship, Gregory Bonito, Christina Cuomo, Alessandro Desiro, Kyle A. Gervers, Hope Hundley, Alan Kuo, Kurt LaButti, B. Franz Lang, Anna Lipzen, Kerry O’Donnell, Jasmyn Pangilinan, Nicole Reynolds, Laura Sandor, Matthew E. Smith, Adrian Tsang, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Publikováno v:
iScience. 25(8)
Fungi survive in diverse ecological niches by secreting proteins and other molecules into the environment to acquire food and interact with various biotic and abiotic stressors. Fungal secretome content is, therefore, believed to be tightly linked to
Autor:
D. Blaine Marchant, Guang Chen, Shengguan Cai, Fei Chen, Peter Schafran, Jerry Jenkins, Shengqiang Shu, Chris Plott, Jenell Webber, John T. Lovell, Guifen He, Laura Sandor, Melissa Williams, Shanmugam Rajasekar, Adam Healey, Kerrie Barry, Yinwen Zhang, Emily Sessa, Rijan R. Dhakal, Paul G. Wolf, Alex Harkess, Fay-Wei Li, Clemens Rössner, Annette Becker, Lydia Gramzow, Dawei Xue, Yuhuan Wu, Tao Tong, Yuanyuan Wang, Fei Dai, Shuijin Hua, Hua Wang, Shengchun Xu, Fei Xu, Honglang Duan, Günter Theißen, Michael R. McKain, Zheng Li, Michael T. W. McKibben, Michael S. Barker, Robert J. Schmitz, Dennis W. Stevenson, Cecilia Zumajo-Cardona, Barbara A. Ambrose, James H. Leebens-Mack, Jane Grimwood, Jeremy Schmutz, Pamela S. Soltis, Douglas E. Soltis, Zhong-Hua Chen
Publikováno v:
Nature plants, vol 8, iss 9
The large size and complexity of most fern genomes have hampered efforts to elucidate fundamental aspects of fern biology and land plant evolution through genome-enabled research. Here we present a chromosomal genome assembly and associated methylome