Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T.

Autor: Ronald M Weiner, Larry E Taylor, Bernard Henrissat, Loren Hauser, Miriam Land, Pedro M Coutinho, Corinne Rancurel, Elizabeth H Saunders, Atkinson G Longmire, Haitao Zhang, Edward A Bayer, Harry J Gilbert, Frank Larimer, Igor B Zhulin, Nathan A Ekborg, Raphael Lamed, Paul M Richardson, Ilya Borovok, Steven Hutcheson

Publikováno v: PLoS Genetics, Vol 4, Iss 5, p e1000087 (2008)

The marine bacterium Saccharophagus degradans strain 2-40 (Sde 2-40) is emerging as a vanguard of a recently discovered group of marine and estuarine bacteria that recycles complex polysaccharides. We report its complete genome sequence, analysis of

Externí odkaz: https://doaj.org/article/86340d663489454bb88b0e1dac8a4632

Distinct roles of N- and O-glycans in cellulase activity and stability

Autor: Todd Shollenberger, John M. Yarbrough, Gregg T. Beckham, Sarah E. Hobdey, Zhongping Tan, Antonella Amore, Lance Wells, Michael E. Himmel, Todd Vander Wall, Peng Zhao, Brandon C. Knott, Larry E. Taylor, Parastoo Azadi, Nitin T. Supekar, Stephen R. Decker, Michael F. Crowley, Jeffrey G. Linger, Asif Shajahan

Publikováno v: Proceedings of the National Academy of Sciences. 114:13667-13672

In nature, many microbes secrete mixtures of glycoside hydrolases, oxidoreductases, and accessory enzymes to deconstruct polysaccharides and lignin in plants. These enzymes are often decorated with N- and O-glycosylation, the roles of which have been

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c440050063805bf8d8c52db75ccd9247
https://doi.org/10.1073/pnas.1714249114

Biochemical and structural characterizations of two Dictyostelium cellobiohydrolases from the Amoebozoa kingdom reveal a high level of conservation between distant phylogenetic trees of life

Autor: Todd A. VanderWall, Kara Podkaminer, Larry E. Taylor, Majid Haddad Momeni, Stephen R. Decker, Gregg T. Beckham, Sarah E. Hobdey, Anna S. Borisova, Jerry Ståhlberg, Michael E. Himmel, Brandon C. Knott

Publikováno v: Hobdey, S E, Knott, B C, Momeni, M H, Taylor, L E, Borisova, A S, Podkaminer, K K, VanderWall, T A, Himmel, M E, Decker, S R, Beckham, G T & Ståhlberg, J 2016, ' Biochemical and structural characterizations of two Dictyostelium cellobiohydrolases from the Amoebozoa kingdom reveal a high level of conservation between distant phylogenetic trees of life ', Applied and Environmental Microbiology, vol. 82, no. 11, pp. 3395-3409 . https://doi.org/10.1128/AEM.00163-16

Glycoside hydrolase family 7 (GH7) cellobiohydrolases (CBHs) are enzymes commonly employed in plant cell wall degradation across eukaryotic kingdoms of life, as they provide significant hydrolytic potential in cellulose turnover. To date, many fungal

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5347a79c595c5e70771ff464ea0f1fef
https://doi.org/10.1128/AEM.00163-16

The Multi Domain Caldicellulosiruptor bescii CelA Cellulase Excels at the Hydrolysis of Crystalline Cellulose

Autor: Sarah Teter, Michael E. Himmel, Ashutosh Mittal, Yannick J. Bomble, Daehwan Chung, Jordan F. Russell, Roman Brunecky, Hanshu Ding, Brian R. Scott, Larry E. Taylor, Bryon S. Donohoe, Janet Westpheling, John M. Yarbrough

Publikováno v: Scientific Reports, Vol 7, Iss 1, Pp 1-17 (2017)
Scientific Reports

The crystalline nature of cellulose microfibrils is one of the key factors influencing biomass recalcitrance which is a key technical and economic barrier to overcome to make cellulosic biofuels a commercial reality. To date, all known fungal enzymes

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::07945e50bee04f5965a96964700f4c7d
https://doi.org/10.1038/s41598-017-08985-w

New perspective on glycoside hydrolase binding to lignin from pretreated corn stover

Autor: Deanne W. Sammond, Michael E. Himmel, Elisabeth Mansfield, Michael F. Crowley, John M. Yarbrough, Yannick J. Bomble, Sarah E. Hobdey, Todd B. Vinzant, Larry E. Taylor, Stephen R. Decker, Ashutosh Mittal

Publikováno v: Biotechnology for Biofuels

Background Non-specific binding of cellulases to lignin has been implicated as a major factor in the loss of cellulase activity during biomass conversion to sugars. It is believed that this binding may strongly impact process economics through loss o

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4e5430b855770dd380529d6ae29fc20a
https://doi.org/10.1186/s13068-015-0397-6