Genomic profiling and spatial SEIR modeling of COVID-19 transmission in Western New York.

Autor: Bard JE; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States.; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Jiang N; Department of Geography, State University of New York at Buffalo, Buffalo, NY, United States., Emerson J; Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Bartz M; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Lamb NA; National Renewable Energy Laboratory, Golden, CO, United States., Marzullo BJ; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Pohlman A; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Boccolucci A; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Nowak NJ; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States.; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Yergeau DA; Genomics and Bioinformatics Core, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States., Crooks AT; Department of Geography, State University of New York at Buffalo, Buffalo, NY, United States., Surtees JA; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States.; Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY, United States.

Publikováno v: Frontiers in microbiology [Front Microbiol] 2024 Sep 27; Vol. 15, pp. 1416580. Date of Electronic Publication: 2024 Sep 27 (Print Publication: 2024).

Tristetraprolin regulates the skeletal phenotype and osteoclastogenic potential through monocytic myeloid-derived suppressor cells.

Autor: Zhang L; Department of Oral Biology, University at Buffalo, Buffalo, New York, USA., Kwack KH; Department of Oral Biology, University at Buffalo, Buffalo, New York, USA.; Department of Oral Microbiology, College of Dentistry, Kyung Hee University, Seoul, Republic of Korea., Thiyagarajan R; Department of Medicine, University at Buffalo, Buffalo, New York, USA.; Division of Geriatrics and Palliative Medicine, University at Buffalo, Buffalo, New York, USA.; Research Service, Veterans Affairs Western New York Healthcare Service, Buffalo, New York, USA., Mullaney KK; Department of Oral Biology, University at Buffalo, Buffalo, New York, USA., Lamb NA; Department of Biochemistry, University at Buffalo, Buffalo, New York, USA.; Genomics and Bioinformatics Core, New York State Center of Excellence for Bioinformatics and Life Sciences, University at Buffalo, The State University of New York, Buffalo, New York, USA., Bard JE; Department of Biochemistry, University at Buffalo, Buffalo, New York, USA.; Genomics and Bioinformatics Core, New York State Center of Excellence for Bioinformatics and Life Sciences, University at Buffalo, The State University of New York, Buffalo, New York, USA., Sohn J; Department of Oral Biology, University at Buffalo, Buffalo, New York, USA.; Department of Medicine, University at Buffalo, Buffalo, New York, USA., Seldeen KL; Department of Medicine, University at Buffalo, Buffalo, New York, USA.; Division of Geriatrics and Palliative Medicine, University at Buffalo, Buffalo, New York, USA.; Research Service, Veterans Affairs Western New York Healthcare Service, Buffalo, New York, USA., Arao Y; Signal Transduction Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, USA., Blackshear PJ; Signal Transduction Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, USA.; Department of Biochemistry, Duke University Medical Center, Durham, North Carolina, USA.; Department of Medicine, Duke University Medical Center, Durham, North Carolina, USA., Abrams SI; Department of Immunology, Roswell Park Comprehensive Cancer Center, Buffalo, New York, USA., Troen BR; Department of Medicine, University at Buffalo, Buffalo, New York, USA.; Division of Geriatrics and Palliative Medicine, University at Buffalo, Buffalo, New York, USA.; Research Service, Veterans Affairs Western New York Healthcare Service, Buffalo, New York, USA., Kirkwood KL; Department of Oral Biology, University at Buffalo, Buffalo, New York, USA.; Head & Neck/Plastic & Reconstructive Surgery, Roswell Park Comprehensive Cancer Center, Buffalo, New York, USA.

Publikováno v: FASEB journal : official publication of the Federation of American Societies for Experimental Biology [FASEB J] 2024 Jan; Vol. 38 (1), pp. e23338.

Robust Performance of SARS-CoV-2 Whole-Genome Sequencing from Wastewater with a Nonselective Virus Concentration Method.

Autor: Segelhurst E; Department of Civil, Structural and Environmental Engineering, University at Buffalo, Buffalo, New York 14260, United States., Bard JE; UB Genomics and Bioinformatics Core, Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, and Genetics, Genomics and Bioinformatics Graduate Program, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York 14203, United States., Pillsbury AN; Department of Civil, Structural and Environmental Engineering, University at Buffalo, Buffalo, New York 14260, United States., Alam MM; Department of Civil, Structural and Environmental Engineering, University at Buffalo, Buffalo, New York 14260, United States., Lamb NA; UB Genomics and Bioinformatics Core, University at Buffalo, Buffalo, New York 14203, United States., Zhu C; Department of Civil, Structural and Environmental Engineering, University at Buffalo, Buffalo, New York 14260, United States., Pohlman A; UB Genomics and Bioinformatics Core, University at Buffalo, Buffalo, New York 14203, United States., Boccolucci A; UB Genomics and Bioinformatics Core, University at Buffalo, Buffalo, New York 14203, United States., Emerson J; Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York 14203, United States., Marzullo BJ; UB Genomics and Bioinformatics Core and Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York 14203, United States., Yergeau DA; UB Genomics and Bioinformatics Core, University at Buffalo, Buffalo, New York 14203, United States., Nowak NJ; UB Genomics and Bioinformatics Core and Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York 14203, United States., Bradley IM; Department of Civil, Structural and Environmental Engineering, University at Buffalo, Buffalo, New York 14260, United States; Research and Education in Energy, Environmental and Water (RENEW) Institute, University at Buffalo, Buffalo, New York 14260, United States., Surtees JA; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, and Genetics, Genomics and Bioinformatics Graduate Program, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York 14203, United States., Ye Y; Department of Civil, Structural and Environmental Engineering, University at Buffalo, Buffalo, New York 14260, United States.

Publikováno v: ACS ES&T water [ACS ES T Water] 2023 Apr 14; Vol. 3 (4), pp. 954-962. Date of Electronic Publication: 2023 Mar 02.

Complex mutation profiles in mismatch repair and ribonucleotide reductase mutants reveal novel repair substrate specificity of MutS homolog (MSH) complexes.

Autor: Lamb NA; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA., Bard JE; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA.; University at Buffalo Genomics and Bioinformatics Core, State University of New York at Buffalo, Buffalo, NY 14203, USA., Loll-Krippleber R; Department of Biochemistry and Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada., Brown GW; Department of Biochemistry and Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada., Surtees JA; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA.; Genetics, Genomics and Bioinformatics Graduate Program, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA.

Publikováno v: Genetics [Genetics] 2022 Jul 30; Vol. 221 (4).

A selection-based next generation sequencing approach to develop robust, genotype-specific mutation profiles in Saccharomyces cerevisiae.

Autor: Lamb NA; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), Buffalo, NY 14203, USA., Bard JE; University at Buffalo Genomics and Bioinformatics Core, Buffalo, NY 14203, USA.; Genetics, Genomics and Bioinformatics Graduate Program, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), Buffalo, NY 14203, USA., Buck MJ; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), Buffalo, NY 14203, USA.; Genetics, Genomics and Bioinformatics Graduate Program, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), Buffalo, NY 14203, USA., Surtees JA; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), Buffalo, NY 14203, USA.; Genetics, Genomics and Bioinformatics Graduate Program, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo (SUNY), Buffalo, NY 14203, USA.

Publikováno v: G3 (Bethesda, Md.) [G3 (Bethesda)] 2021 Jun 17; Vol. 11 (6).