Towards complete and error-free genome assemblies of all vertebrate species

Autor: Rhie, Arang, McCarthy, Shane A, Fedrigo, Olivier, Damas, Joana, Formenti, Giulio, Koren, Sergey, Uliano-Silva, Marcela, Chow, William, Fungtammasan, Arkarachai, Kim, Juwan, Lee, Chul, Ko, Byung June, Chaisson, Mark, Gedman, Gregory L, Cantin, Lindsey J, Thibaud-Nissen, Francoise, Haggerty, Leanne, Bista, Iliana, Smith, Michelle, Haase, Bettina, Mountcastle, Jacquelyn, Winkler, Sylke, Paez, Sadye, Howard, Jason, Vernes, Sonja C, Lama, Tanya M, Grutzner, Frank, Warren, Wesley C, Balakrishnan, Christopher N, Burt, Dave, George, Julia M, Biegler, Matthew T, Iorns, David, Digby, Andrew, Eason, Daryl, Robertson, Bruce, Edwards, Taylor, Wilkinson, Mark, Turner, George, Meyer, Axel, Kautt, Andreas F, Franchini, Paolo, Detrich, H William, Svardal, Hannes, Wagner, Maximilian, Naylor, Gavin JP, Pippel, Martin, Malinsky, Milan, Mooney, Mark, Simbirsky, Maria, Hannigan, Brett T, Pesout, Trevor, Houck, Marlys, Misuraca, Ann, Kingan, Sarah B, Hall, Richard, Kronenberg, Zev, Sović, Ivan, Dunn, Christopher, Ning, Zemin, Hastie, Alex, Lee, Joyce, Selvaraj, Siddarth, Green, Richard E, Putnam, Nicholas H, Gut, Ivo, Ghurye, Jay, Garrison, Erik, Sims, Ying, Collins, Joanna, Pelan, Sarah, Torrance, James, Tracey, Alan, Wood, Jonathan, Dagnew, Robel E, Guan, Dengfeng, London, Sarah E, Clayton, David F, Mello, Claudio V, Friedrich, Samantha R, Lovell, Peter V, Osipova, Ekaterina, Al-Ajli, Farooq O, Secomandi, Simona, Kim, Heebal, Theofanopoulou, Constantina, Hiller, Michael, Zhou, Yang, Harris, Robert S, Makova, Kateryna D, Medvedev, Paul, Hoffman, Jinna, Masterson, Patrick, Clark, Karen, Martin, Fergal, Howe, Kevin, Flicek, Paul, Walenz, Brian P, Kwak, Woori, Clawson, Hiram

Publikováno v: Nature, vol 592, iss 7856

High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are available for only a few non-microbial species1-4. To address this

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::d9b995a5c927b3de46b88782d15293b9
https://escholarship.org/uc/item/8sq9511h

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The North American model and captive cervid facilities—What is the threat?

Autor: Organ, John F., Decker, Thomas A., Lama, Tanya M.

Publikováno v: Wildlife Society Bulletin; March 2016, Vol. 40 Issue: 1 p10-13, 4p

Towards complete and error-free genome assemblies of all vertebrate species

Autor: Rhie, Arang, McCarthy, Shane A, Fedrigo, Olivier, Damas, Joana, Formenti, Giulio, Koren, Sergey, Uliano-Silva, Marcela, Chow, William, Fungtammasan, Arkarachai, Kim, Juwan, Lee, Chul, Ko, Byung June, Chaisson, Mark, Gedman, Gregory L, Cantin, Lindsey J, Thibaud-Nissen, Francoise, Haggerty, Leanne, Bista, Iliana, Smith, Michelle, Haase, Bettina, Mountcastle, Jacquelyn, Winkler, Sylke, Paez, Sadye, Howard, Jason, Vernes, Sonja C, Lama, Tanya M, Grutzner, Frank, Warren, Wesley C, Balakrishnan, Christopher N, Burt, Dave, George, Julia M, Biegler, Matthew T, Iorns, David, Digby, Andrew, Eason, Daryl, Robertson, Bruce, Edwards, Taylor, Wilkinson, Mark, Turner, George, Meyer, Axel, Kautt, Andreas F, Franchini, Paolo, Detrich, H William, Svardal, Hannes, Wagner, Maximilian, Naylor, Gavin JP, Pippel, Martin, Malinsky, Milan, Mooney, Mark, Simbirsky, Maria, Hannigan, Brett T, Pesout, Trevor, Houck, Marlys, Misuraca, Ann, Kingan, Sarah B, Hall, Richard, Kronenberg, Zev, Sović, Ivan, Dunn, Christopher, Ning, Zemin, Hastie, Alex, Lee, Joyce, Selvaraj, Siddarth, Green, Richard E, Putnam, Nicholas H, Gut, Ivo, Ghurye, Jay, Garrison, Erik, Sims, Ying, Collins, Joanna, Pelan, Sarah, Torrance, James, Tracey, Alan, Wood, Jonathan, Dagnew, Robel E, Guan, Dengfeng, London, Sarah E, Clayton, David F, Mello, Claudio V, Friedrich, Samantha R, Lovell, Peter V, Osipova, Ekaterina, Al-Ajli, Farooq O, Secomandi, Simona, Kim, Heebal, Theofanopoulou, Constantina, Hiller, Michael, Zhou, Yang, Harris, Robert S, Makova, Kateryna D, Medvedev, Paul, Hoffman, Jinna, Masterson, Patrick, Clark, Karen, Martin, Fergal, Howe, Kevin, Flicek, Paul, Walenz, Brian P, Kwak, Woori, Clawson, Hiram, Diekhans, Mark, Nassar, Luis, Paten, Benedict, Kraus, Robert HS, Crawford, Andrew J, Gilbert, M Thomas P, Zhang, Guojie, Venkatesh, Byrappa, Murphy, Robert W, Koepfli, Klaus-Peter, Shapiro, Beth, Johnson, Warren E, Di Palma, Federica, Marques-Bonet, Tomas, Teeling, Emma C, Warnow, Tandy, Graves, Jennifer Marshall, Ryder, Oliver A, Haussler, David, O'Brien, Stephen J, Korlach, Jonas, Lewin, Harris A, Howe, Kerstin, Myers, Eugene W, Durbin, Richard, Phillippy, Adam M, Jarvis, Erich D

High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are available for only a few non-microbial species1-4. To address this

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::0fdf6dfed41b0ddc54b1979f1e3c46fe

Extensive longevity and DNA virus-driven adaptation in nearctic Myotis bats.

Autor: Vazquez JM; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA USA., Lauterbur ME; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ USA.; Current affiliation: Department of Biology, University of Vermont, Burlington, VT USA., Mottaghinia S; Centre International de Recherche en Infectiologie (CIRI), Inserm U1111, UCBL1, CNRS UMR5308, Ecole Normale Supérieure ENS de Lyon, Université de Lyon, Lyon, France., Bucci M; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ USA., Fraser D; Wildlife Genetics Research Unit, Wildlife Health Laboratory, California Department of Fish and Wildlife, Sacramento, CA, United States.; Current affiliation: Wildlife Diversity Program, Wildlife Division, Connecticut Department of Energy and Environmental Protection, Burlington, CT, United States., Gray-Sandoval G; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ USA., Gaucherand L; Université de Strasbourg, Architecture et Réactivité de l'ARN, Institut de Biologie Moléculaire et Cellulaire du CNRS, Strasbourg, France., Haidar ZR; Department of Biology, California State Polytechnic University, Humboldt, Arcata, CA USA.; Current affiliation: Western EcoSystems Technology Inc, Cheyenne, WY USA., Han M; Department of Pathology and Clinical Laboratories, University of Michigan, Ann Arbor, MI USA., Kohler W; Department of Pathology and Clinical Laboratories, University of Michigan, Ann Arbor, MI USA., Lama TM; Department of Biological Sciences, Smith College, Northampton, MA USA., Le Corf A; Centre International de Recherche en Infectiologie (CIRI), Inserm U1111, UCBL1, CNRS UMR5308, Ecole Normale Supérieure ENS de Lyon, Université de Lyon, Lyon, France., Maesen S; Centre International de Recherche en Infectiologie (CIRI), Inserm U1111, UCBL1, CNRS UMR5308, Ecole Normale Supérieure ENS de Lyon, Université de Lyon, Lyon, France., McMillan D; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA USA.; Department of Science and Biotechnology, Berkeley City College, Berkeley, CA USA., Li S; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA USA.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA USA., Lo J; Center for Computational Biology, University of California, Berkeley, Berkeley, CA USA., Rey C; Centre International de Recherche en Infectiologie (CIRI), Inserm U1111, UCBL1, CNRS UMR5308, Ecole Normale Supérieure ENS de Lyon, Université de Lyon, Lyon, France., Capel SL; Current affiliation: Wildlife Diversity Program, Wildlife Division, Connecticut Department of Energy and Environmental Protection, Burlington, CT, United States., Singer M; Department of Molecular and Cellular Biology, University of California, Berkeley, Berkeley, CA USA., Slocum K; Bat Conservation International, Austin, TX USA., Thomas W; Department of Ecology and Evolution, Stony Brook University, Stony Brook NY USA., Tyburec JD; Bat Survey Solutions, LLC, Tucson, AZ USA., Villa S; Department of Molecular and Cellular Biology, University of California, Berkeley, Berkeley, CA USA., Miller R; Department of Pathology and Clinical Laboratories, University of Michigan, Ann Arbor, MI USA., Buchalski M; Wildlife Genetics Research Unit, Wildlife Health Laboratory, California Department of Fish and Wildlife, Sacramento, CA, United States., Vazquez-Medina JP; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA USA., Pfeffer S; Université de Strasbourg, Architecture et Réactivité de l'ARN, Institut de Biologie Moléculaire et Cellulaire du CNRS, Strasbourg, France., Etienne L; Centre International de Recherche en Infectiologie (CIRI), Inserm U1111, UCBL1, CNRS UMR5308, Ecole Normale Supérieure ENS de Lyon, Université de Lyon, Lyon, France., Enard D; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ USA., Sudmant PH; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA USA.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA USA.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2024 Oct 11. Date of Electronic Publication: 2024 Oct 11.