Systems biology as a framework to understand the physiological and endocrine bases of behavior and its evolution—From concepts to a case study in birds

Autor: Matthew J. Fuxjager, T. Brandt Ryder, Nicole M. Moody, Camilo Alfonso, Christopher N. Balakrishnan, Julia Barske, Mariane Bosholn, W. Alice Boyle, Edward L. Braun, Ioana Chiver, Roslyn Dakin, Lainy B. Day, Robert Driver, Leonida Fusani, Brent M. Horton, Rebecca T. Kimball, Sara Lipshutz, Claudio V. Mello, Eliot T. Miller, Michael S. Webster, Morgan Wirthlin, Roy Wollman, Ignacio T. Moore, Barney A. Schlinger

Publikováno v: Hormones and Behavior. 151:105340

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::18d6624e9fd0f81cc4f2a21cbbcfad62
https://doi.org/10.1016/j.yhbeh.2023.105340

Dense sampling of bird diversity increases power of comparative genomics

Autor: Rencia van der Sluis, Nadine Thiele, Borja Milá, Araxi O. Urrutia, Josefin Stiller, Joel Cracraft, Zongji Wang, Qiye Li, Barney A. Schlinger, Guojie Zhang, Ana Tereza Ribeiro de Vasconcelos, Oliver A. Ryder, Rebecca B. Dikow, Thomas L. Parchman, Emily Cavill, John G. Blake, Libby C. Megna, Andrew G. Clark, Christopher C. Witt, Ángela M. Parody-Merino, Jason T. Weir, Wanjun Chen, Jason T. Howard, T. Brandt Ryder, Michael G. Campana, Jon Fjeldså, Robb T. Brumfield, M. Thomas P. Gilbert, Alexandre Aleixo, Gerald Borgia, Qi Fang, Phil F. Battley, Ellen D. Ketterson, Matthew I. M. Louder, Scott A. Taylor, Glaucia Del-Rio, Scott V. Edwards, Sergio Andreu-Sánchez, Fumin Lei, Irby J. Lovette, Neil J. Gemmell, Mikkel-Holger S. Sinding, Carole A. Parent, Huanming Yang, André E. R. Soares, David W. Burt, Guanliang Meng, André Corvelo, Nicolas Dussex, Jimmy A. McGuire, Kira E. Delmore, Marc P. Hoeppner, Julio Rozas, Ângela M. Ribeiro, Les Christidis, Haw Chuan Lim, Guillermo Friis, Guangji Chen, Martin Stervander, Mads F. Bertelsen, Siavash Mirarab, Biao Wang, Hanna Sigeman, Lara Puetz, Qi Zhou, Marta Riutort, Knud A. Jønsson, Christopher N. Balakrishnan, Alexander Suh, Edward L. Braun, Nicholas Costa Barroso Lima, Jeffrey M. DaCosta, Reed Bowman, Yang Liu, Kim Rutherford, Ashot Margaryan, Peter Njoroge, Beth Shapiro, Benedict Paten, Shaohong Feng, Adam M. Fudickar, Jacob González-Solís, Bent O. Petersen, Subir B. Shakya, Henrik Mouritsen, Glauco Camenisch, Maude W. Baldwin, Andrew Hart Reeve, Bruce C. Robertson, Morgan Wirthlin, Shannon J. Hackett, Chunxue Guo, Bengt Hansson, Peter G. Ryan, Miriam Liedvogel, Alain Vignal, Saul J. Cowen, Matthew J. Fuxjager, Robert C. Fleischer, Dustin J. Foote, Joel Armstrong, Joann Mudge, Nancy F. Chen, Santiago Claramunt, Joan Ferrer-Obiol, John W. Fitzpatrick, Leopold Eckhart, Mark E. Hauber, Michael Bunce, Carsten Rahbek, George Pacheco, Dieter Thomas Tietze, Gang Song, Jérôme Fuchs, John P. Dumbacher, Henriette van der Zwan, Love Dalén, Michael J. Braun, Lukas F. Keller, Yuan Deng, Jian Wang, Thomas Sicheritz-Pontén, Tamás Székely, Erich D. Jarvis, Alison Cloutier, David Haussler, Matthew D. Carling, Carina Visser, Paul B. Frandsen, Anna Tigano, Andre Franke, Suvi Ponnikas, Claudio V. Mello, Vicki L. Friesen, Timothy B. Sackton, Rute R. da Fonseca, Frederick H. Sheldon, Duo Xie, Brant C. Faircloth, Bette A. Loiselle, Gary R. Graves, Ian G. Jamieson, Mark Diekhans, Lainy B. Day, Peter A. Hosner, Murray P. Cox, Oliver Krone, Andrew E. Fidler, Peter Houde, Francisco Prosdocimi

Publikováno v: Digital.CSIC. Repositorio Institucional del CSIC
instname
Nature, 587(7833), 252-257. Nature Publishing Group
Nature
Nature, Nature Publishing Group, 2020, 587 (7833), pp.252-257. ⟨10.1038/s41586-020-2873-9⟩
Dipòsit Digital de la UB
Universidad de Barcelona
Josefin Stiller
Natureevents directory, 587(7833):252-257
Feng, S, Stiller, J, Deng, Y, Armstrong, J, Fang, Q, Reeve, A H, Xie, D, Chen, G, Guo, C, Faircloth, B C, Petersen, B, Wang, Z, Zhou, Q, Diekhans, M, Chen, W, Andreu-Sánchez, S, Margaryan, A, Howard, J T, Parent, C, Pacheco, G, Sinding, M-H S, Puetz, L, Cavill, E, Ribeiro, Â M, Eckhart, L, Fjeldså, J, Hosner, P A, Brumfield, R T, Christidis, L, Bertelsen, M F, Sicheritz-Ponten, T, Tietze, D T, Robertson, B C, Song, G, Borgia, G, Claramunt, S, Lovette, I J, Cowen, S J, Njoroge, P, Dumbacher, J P, Ryder, O A, Fuchs, J, Bunce, M, Burt, D W, Cracraft, J, Meng, G, Hackett, S J, Ryan, P G, Jønsson, K A, Jamieson, I G, da Fonseca, R R, Braun, E L, Houde, P, Mirarab, S, Suh, A, Hansson, B, Ponnikas, S, Sigeman, H, Stervander, M, Frandsen, P B, van der Zwan, H, van der Sluis, R, Visser, C, Balakrishnan, C N, Clark, A G, Fitzpatrick, J W, Bowman, R, Chen, N, Cloutier, A, Sackton, T B, Edwards, S V, Foote, D J, Shakya, S B, Sheldon, F H, Vignal, A, Soares, A E R, Shapiro, B, González-Solís, J, Ferrer-Obiol, J, Rozas, J, Riutort, M, Tigano, A, Friesen, V, Dalén, L, Urrutia, A O, Székely, T, Liu, Y, Campana, M G, Corvelo, A, Fleischer, R C, Rutherford, K M, Gemmell, N J, Dussex, N, Mouritsen, H, Thiele, N, Delmore, K, Liedvogel, M, Franke, A, Hoeppner, M P, Krone, O, Fudickar, A M, Milá, B, Ketterson, E D, Fidler, A E, Friis, G, Parody-Merino, Á M, Battley, P F, Cox, M P, Lima, N C B, Prosdocimi, F, Parchman, T L, Schlinger, B A, Loiselle, B A, Blake, J G, Lim, H C, Day, L B, Fuxjager, M J, Baldwin, M W, Braun, M J, Wirthlin, M, Dikow, R B, Ryder, T B, Camenisch, G, Keller, L F, DaCosta, J M, Hauber, M E, Louder, M I M, Witt, C C, McGuire, J A, Mudge, J, Megna, L C, Carling, M D, Wang, B, Taylor, S A, Del-Rio, G, Aleixo, A, Vasconcelos, A T R, Mello, C V, Weir, J T, Haussler, D, Li, Q, Yang, H, Wang, J, Lei, F, Rahbek, C, Gilbert, M T P, Graves, G R, Jarvis, E D, Paten, B & Zhang, G 2020, ' Dense sampling of bird diversity increases power of comparative genomics ', Nature, vol. 587, no. 7833, pp. 252-257 . https://doi.org/10.1038/s41586-020-2873-9

Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity1–4. Sparse taxon sampling has previously been proposed to confound phylogenetic inference5, and captures only a fraction of the genomic di

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::129fbbd5bf327bb1d02e24296333b46e
http://hdl.handle.net/10138/322047

Androgens regulate gene expression in avian skeletal muscles.

Autor: Matthew J Fuxjager, Julia Barske, Sienmi Du, Lainy B Day, Barney A Schlinger

Publikováno v: PLoS ONE, Vol 7, Iss 12, p e51482 (2012)

Circulating androgens in adult reproductively active male vertebrates influence a diversity of organ systems and thus are considered costly. Recently, we obtained evidence that androgen receptors (AR) are expressed in several skeletal muscles of thre

Externí odkaz: https://doaj.org/article/f89c21ef28ac409db36226e3ca7f508b

Learning to learn: advanced behavioural flexibility in a poison frog

Autor: Kyle Summers, Yuxiang Liu, Sabrina S. Burmeister, Lainy B. Day

Publikováno v: Animal Behaviour. 111:167-172

Behavioural flexibility is essential for survival in a world with changing contingencies and its evolution is linked to complex physical and social environments. Serial reversal learning, in which reward contingencies change frequently, is a key indi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::2b50c251ac76a762297cf95f8e7f220b
https://doi.org/10.1016/j.anbehav.2015.10.018

A cognitive map in a poison frog

Autor: Kyle Summers, Lainy B. Day, Yuxiang Liu, Sabrina S. Burmeister

Publikováno v: The Journal of experimental biology. 222(Pt 11)

A fundamental question in cognitive science is whether an animal can use a cognitive map. A cognitive map is a mental representation of the external world, and knowledge of one's place in this world, that can be used to determine efficient routes to

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9343c993b0cf8bb6544bc0e7b77a54a1
https://pubmed.ncbi.nlm.nih.gov/31182504