Zobrazeno 1 - 10
of 33
pro vyhledávání: '"Kyle Fletcher"'
Autor:
Kyle Fletcher, Oon-Ha Shin, Kelley J. Clark, Chunda Feng, Alexander I. Putman, James C. Correll, Steven J. Klosterman, Allen Van Deynze, Richard W. Michelmore
Publikováno v:
Molecular Plant-Microbe Interactions, Vol 35, Iss 6, Pp 450-463 (2022)
Downy mildew disease of spinach, caused by the oomycete Peronospora effusa, causes major losses to spinach production. In this study, the 17 chromosomes of P. effusa were assembled telomere-to-telomere, using Pacific Biosciences high-fidelity reads.
Externí odkaz:
https://doaj.org/article/5b8ec9258b1c4584936a44453c9873a1
Publikováno v:
BMC Bioinformatics, Vol 23, Iss 1, Pp 1-15 (2022)
Abstract Background Polyploidy and heterokaryosis are common and consequential genetic phenomena that increase the number of haplotypes in an organism and complicate whole-genome sequence analysis. Allele balance has been used to infer polyploidy and
Externí odkaz:
https://doaj.org/article/b37bae44cb3746afb9ab0851dd51dd52
Autor:
Kyle Fletcher, Frank Martin, Thomas Isakeit, Keri Cavanaugh, Clint Magill, Richard Michelmore
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 13, Iss 3 (2023)
AbstractSeveral species in the oomycete genus PeronosclerosporaPeronosclerosporaP. sorghiP. sorghiPeronospora effusaP. sorghiPeronosclerosporaPeronosclerospora
Externí odkaz:
https://doaj.org/article/8a35eb7b39cb4d0687be5ad4b3e824f1
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-26 (2021)
Abstract Our assembly-free linkage analysis pipeline (AFLAP) identifies segregating markers as k-mers in the raw reads without using a reference genome assembly for calling variants and provides genotype tables for the construction of unbiased, high-
Externí odkaz:
https://doaj.org/article/fb66b5440822482086acd6e43b226798
Autor:
Kyle Fletcher, Juliana Gil, Lien D. Bertier, Aubrey Kenefick, Kelsey J. Wood, Lin Zhang, Sebastian Reyes-Chin-Wo, Keri Cavanaugh, Cayla Tsuchida, Joan Wong, Richard Michelmore
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
The oomycete Bremia lactucae is a highly variable pathogen that causes lettuce downy mildew. Here, the authors generate a high-quality genome assembly for B. lactucae, detect a high prevalence of heterokaryosis, and investigate its pathogenic consequ
Externí odkaz:
https://doaj.org/article/05e574ab580f476d8f9a6ba186ded688
Autor:
Kelsey J Wood, Munir Nur, Juliana Gil, Kyle Fletcher, Kim Lakeman, Dasan Gann, Ayumi Gothberg, Tina Khuu, Jennifer Kopetzky, Sanye Naqvi, Archana Pandya, Chi Zhang, Brigitte Maisonneuve, Mathieu Pel, Richard Michelmore
Publikováno v:
PLoS Pathogens, Vol 16, Iss 10, p e1009012 (2020)
Pathogens that infect plants and animals use a diverse arsenal of effector proteins to suppress the host immune system and promote infection. Identification of effectors in pathogen genomes is foundational to understanding mechanisms of pathogenesis,
Externí odkaz:
https://doaj.org/article/3d14ae7dbf92480994238b2e6f7255ce
Autor:
Kyle Fletcher, Steven J. Klosterman, Lida Derevnina, Frank Martin, Lien D. Bertier, Steven Koike, Sebastian Reyes-Chin-Wo, Beiquan Mou, Richard Michelmore
Publikováno v:
BMC Genomics, Vol 19, Iss 1, Pp 1-23 (2018)
Abstract Background Spinach downy mildew caused by the oomycete Peronospora effusa is a significant burden on the expanding spinach production industry, especially for organic farms where synthetic fungicides cannot be deployed to control the pathoge
Externí odkaz:
https://doaj.org/article/18131c30e50140c0a2baac6a0e3d7585
Publikováno v:
Pathogens, Vol 9, Iss 1, p 24 (2019)
Cyclophilins (CYPs), a highly-conserved family of proteins, belong to a subgroup of immunophilins. Ubiquitous in eukaryotes and prokaryotes, CYPs have peptidyl-prolyl cis−trans isomerase (PPIase) activity and have been implicated as virulence facto
Externí odkaz:
https://doaj.org/article/4e41e1463b504498a69e068d1faeb850
Autor:
Kyle Fletcher, Frank Martin, Thomas Isakeit, Keri Cavanaugh, Clint Magill, Richard Michelmore
Publikováno v:
G3 (Bethesda, Md.), vol 13, iss 3
Several species in the oomycete genus Peronosclerospora cause downy mildew on maize and can result in significant yield losses in Asia. Biosurveillance of these pathogens is a high priority to prevent epidemics on maize in the US and consequent damag
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab5ade66b04ece283bad5772a1eb4ba3
https://doi.org/10.1093/g3journal/jkac340
https://doi.org/10.1093/g3journal/jkac340
Publikováno v:
Botanica Marina. 64:455-460
The finding of the enigmatic pathogen Anisolpidium rosenvingei in the filamentous brown macroalga Pylaiella littoralis presented a unique opportunity to histochemically study the distribution of chitin in this little-known pathogen using FUNGALASE™
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b692dfdf725e0243611a48e56256981b
https://doi.org/10.1515/bot-2021-0018
https://doi.org/10.1515/bot-2021-0018