Zobrazeno 1 - 10
of 12
pro vyhledávání: '"Kuldip Paliwal"'
Publikováno v:
Remote Sensing, Vol 16, Iss 16, p 2926 (2024)
The radio frequency (RF) data generated from a single-chip millimeter-wave (mmWave) ground-based multi-input multi-output (GB-MIMO) radar can provide a highly robust, precise measurement for deformation in harsh environments, overcoming challenges su
Externí odkaz:
https://doaj.org/article/396931e2be8e4440b998d63d2bba6ae1
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-9 (2022)
Abstract Protein language models have emerged as an alternative to multiple sequence alignment for enriching sequence information and improving downstream prediction tasks such as biophysical, structural, and functional properties. Here we show that
Externí odkaz:
https://doaj.org/article/a1de07e4ee8b45c1b1d1fb4f88b98bf4
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
The limited availability of high-resolution 3D RNA structures for model training limits RNA secondary structure prediction. Here, the authors overcome this challenge by pre-training a DNN on a large set of predicted RNA structures and using transfer
Externí odkaz:
https://doaj.org/article/90cc291b0b6b40a7a04fcac4f370cd90
Unlike 20-letter-coded proteins, RNA homologous sequences are notoriously difficult to detect because their 4-letter-coded sequences can quickly lose their sequence identity. As a result, employing secondary structures has been found necessary to imp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e355387642a263f271c72a051f03aae4
https://doi.org/10.1101/2022.10.03.510702
https://doi.org/10.1101/2022.10.03.510702
Publikováno v:
Briefings in Bioinformatics. 23
Characterizing RNA structures and functions have mostly been focused on 2D, secondary and 3D, tertiary structures. Recent advances in experimental and computational techniques for probing or predicting RNA solvent accessibility make this 1D represent
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5387e580c8f9b54f64074b1795019ace
https://doi.org/10.1093/bib/bbac112
https://doi.org/10.1093/bib/bbac112
Publikováno v:
Applied Acoustics. 202:109134
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4fd3f8515061f55768bba86a52922863
https://doi.org/10.1016/j.apacoust.2022.109134
https://doi.org/10.1016/j.apacoust.2022.109134
Publikováno v:
Bioinformatics (Oxford, England). 38(16)
Motivation Recently, AlphaFold2 achieved high experimental accuracy for the majority of proteins in Critical Assessment of Structure Prediction (CASP 14). This raises the hope that one day, we may achieve the same feat for RNA structure prediction fo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::137a74c351a80e782b1e773f94dd635e
https://pubmed.ncbi.nlm.nih.gov/35751593
https://pubmed.ncbi.nlm.nih.gov/35751593
Publikováno v:
Bioinformatics (Oxford, England). 38(7)
Motivation Accurate prediction of protein contact-map is essential for accurate protein structure and function prediction. As a result, many methods have been developed for protein contact map prediction. However, most methods rely on protein-sequenc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5381c0a76da89757e1d73829aff4922f
https://pubmed.ncbi.nlm.nih.gov/35104320
https://pubmed.ncbi.nlm.nih.gov/35104320
Autor:
Yuedong, Yang, Rhys, Heffernan, Kuldip, Paliwal, James, Lyons, Abdollah, Dehzangi, Alok, Sharma, Jihua, Wang, Abdul, Sattar, Yaoqi, Zhou
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1484
Predicting one-dimensional structure properties has played an important role to improve prediction of protein three-dimensional structures and functions. The most commonly predicted properties are secondary structure and accessible surface area (ASA)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::a09777faaea08e1fedefdccb2c82c8af
https://pubmed.ncbi.nlm.nih.gov/27787820
https://pubmed.ncbi.nlm.nih.gov/27787820
Autor:
Roger Chappel, Kuldip Paliwal
Publikováno v:
Interspeech 2012.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5fdf7ab1d32f95ad6ece9876823ec35f
https://doi.org/10.21437/interspeech.2012-512
https://doi.org/10.21437/interspeech.2012-512