Zobrazeno 1 - 10
of 155
pro vyhledávání: '"Kukalev, A."'
Autor:
Silvia Carvalho, Luna Zea-Redondo, Tsz Ching Chloe Tang, Philipp Stachel-Braum, Duncan Miller, Paulo Caldas, Alexander Kukalev, Sebastian Diecke, Stefanie Grosswendt, Ana Rita Grosso, Ana Pombo
Publikováno v:
Biology Open, Vol 13, Iss 4 (2024)
Externí odkaz:
https://doaj.org/article/835dd6bdcc524225a60cff953256df68
Akademický článek
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Akademický článek
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Autor:
Beagrie, R.A., Thieme, C.J., Annunziatella, C., Baugher, C., Zhang, Y., Schueler, M., Kukalev, A., Kempfer, R., Chiariello, A.M., Bianco, S., Li, Y., Davis, T., Scialdone, A., Welch, L.R., Nicodemi, M., Pombo, A.
Technology for measuring 3D genome topology is increasingly important for studying gene regulation, for genome assembly and for mapping of genome rearrangements. Hi-C and other ligation-based methods have become routine but have specific biases. Here
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=mdc______med::d7ade1b0515952f4c37b2d7c6b62018d
http://edoc.mdc-berlin.de/23377/1/23377oa.pdf
http://edoc.mdc-berlin.de/23377/1/23377oa.pdf
Autor:
Wolfengagen, Viacheslav E., Ismailova, Larisa Yu., Kosikov, Sergey V., Navrotskiy, Viacheslav V., Kukalev, Sergey I., Zuev, Alexander A., Belyatskaya, Polina V.
Publikováno v:
In Procedia Computer Science 2016 88:347-352
Autor:
Gesa Loof, Dominik Szabó, Vidur Garg, Alexander Kukalev, Luna Zea-Redondo, Rieke Kempfer, Thomas M. Sparks, Yingnan Zhang, Christoph J Thieme, Sílvia Carvalho, Anja Weise, Milash Balachandran, Thomas Liehr, Lonnie R. Welch, Anna-Katerina Hadjantonakis, Ana Pombo
SummaryThe development of embryonic cell lineages is tightly controlled by transcription factors that regulate gene expression and chromatin organisation. To investigate the specialisation of 3D genome structure in pluripotent or extra-embryonic endo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::918b39c49518a5aa8e7d076a3d198851
https://doi.org/10.1101/2022.10.19.512781
https://doi.org/10.1101/2022.10.19.512781
Autor:
Winick-Ng, Warren, Kukalev, Alexander, Harabula, Izabela, Zea-Redondo, Luna, Szab��, Dominik, Meijer, Mandy, Serebreni, Leonid, Zhang, Yingnan, Bianco, Simona, Chiariello, Andrea M, Irastorza-Azcarate, Ibai, Thieme, Christoph J, Sparks, Thomas M, Carvalho, S��lvia, Fiorillo, Luca, Musella, Francesco, Irani, Ehsan, Triglia, Elena Torlai, Kolodziejczyk, Aleksandra A, Abentung, Andreas, Apostolova, Galina, Paul, Eleanor J, Franke, Vedran, Kempfer, Rieke, Akalin, Altuna, Teichmann, Sarah, Dechant, Georg, Ungless, Mark A, Nicodemi, Mario, Welch, Lonnie, Castelo-Branco, Gon��alo, Pombo, Ana
Publikováno v:
Nature
The three-dimensional (3D) structure of chromatin is intrinsically associated with gene regulation and cell function1–3. Methods based on chromatin conformation capture have mapped chromatin structures in neuronal systems such as in vitro different
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4004c313c1726e838a60f710436852c1
https://www.repository.cam.ac.uk/handle/1810/331027
https://www.repository.cam.ac.uk/handle/1810/331027
Autor:
João D Dias, Tiago Rito, Elena Torlai Triglia, Alexander Kukalev, Carmelo Ferrai, Mita Chotalia, Emily Brookes, Hiroshi Kimura, Ana Pombo
Publikováno v:
eLife, Vol 4 (2015)
Dynamic post-translational modification of RNA polymerase II (RNAPII) coordinates the co-transcriptional recruitment of enzymatic complexes that regulate chromatin states and processing of nascent RNA. Extensive phosphorylation of serine residues at
Externí odkaz:
https://doaj.org/article/1a08d1a74ffd4c62b1d667cf02abbab1
Autor:
Andrea M. Chiariello, Mattia Conte, Alexander Kukalev, Simona Bianco, Francesco Musella, Rieke Kempfer, Ana Pombo, Andrea Esposito, Luca Fiorillo, Alex Abraham, Mario Nicodemi, Antonella Prisco, Ibai Irastorza-Azcarate
Hi-C, split-pool recognition of interactions by tag extension (SPRITE) and genome architecture mapping (GAM) are powerful technologies utilized to probe chromatin interactions genome wide, but how faithfully they capture three-dimensional (3D) contac
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd28225aed5b02ac62b41aa32eb5a619
http://hdl.handle.net/11588/863502
http://hdl.handle.net/11588/863502
Autor:
Rieke Kempfer, Julia Markowski, Roland F. Schwarz, Ibai Irastorza-Azcarate, Alexander Kukalev, Ana Pombo, Sven Rahmann, Gesa Loof, Birte Kehr
Publikováno v:
Bioinformatics
MotivationGenome Architecture Mapping (GAM) was recently introduced as a digestion- and ligation-free method to detect chromatin conformation. Orthogonal to existing approaches based on chromatin conformation capture (3C), GAM’s ability to capture
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::908282a6abb90ce36fbc359a4ca9e79b
http://edoc.mdc-berlin.de/20168/1/20168oa.pdf
http://edoc.mdc-berlin.de/20168/1/20168oa.pdf