Novel Informatic Tools to Support Functional Annotation of the Durum Wheat Genome

Autor: Mario Fruzangohar, Elena Kalashyan, Priyanka Kalambettu, Jennifer Ens, Krysta Wiebe, Curtis J. Pozniak, Penny J. Tricker, Ute Baumann

Publikováno v: Frontiers in Plant Science, Vol 10 (2019)

Seed mutagenesis is one strategy to create a population with thousands of useful mutations for the direct selection of desirable traits, to introduce diversity into varietal improvement programs, or to generate a mutant collection to support gene fun

Externí odkaz: https://doaj.org/article/a3ef17245135486f9d163cafe7c03584

Development of Resources for Mapping, GWAS and Allele Mining in Tetraploid Wheat Based on Svevo Durum Reference Sequence

Autor: Marco Maccaferri, Anna M. Mastrangelo, Elisabetta Mazzucotelli, Reem Joukhadar, Raj K. Pasam, Francesca Desiderio, Sara Milner, Danara Ormanbekova, Simona Corneti, Silvio Salvi, Roberto Tuberosa, Neil S. Harris, Gabriella Sonnante, Benjamin Kilian, Hakan Ozkan, Pasquale De Vita, Daniela Marone, Domenica Nigro, Agata Gadaleta, Mike Pumphrey, Weizhen Liu, Michela Janni, Domenico De Paola, Krysta Wiebe, John M. Clarke, Ron Knox, Assaf Distelfeld, Aldo Ceriotti, Nicola Pecchioni, Curtis J. Pozniak, Steven S. Xu, Shiaoman Chao, Matthew J. Hayden, Luigi Cattivelli

The assembled Svevo durum wheat genome and the iSelect wheat 90K SNP array were used as a base to characterize a world-wide tetraploid wheat collection. We report on the diversity pattern of 1,854 non-redundant accessions from all known Triticum turg

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______4094::95fe12d3642c27ad84355b285c7cc1a0
http://hdl.handle.net/11585/731509

A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

Autor: Laura-Jayne Gardiner, Anthony Hall, Krysta Wiebe, Christine Sidebottom, Debbie Wong, Katherine W. Jordan, Pierre Hucl, Eduard Akhunov, Kerrie Forrest, Ron MacLachlan, Jorge Dubcovsky, Curtis J. Pozniak, Yanni Lun, Shichen Wang, Andrew G. Sharpe, Neil Hall, Luther E. Talbert, Matthew J. Hayden, Christopher Toomajian, Harbans Bariana, Timothy J. Close, Alina Akhunova, Urmil Bansal, Jeffrey A. Jeddeloh

Publikováno v: Genome Biology
ResearcherID
Jordan, KW; Wang, S; Lun, Y; Gardiner, LJ; MacLachlan, R; Hucl, P; et al.(2015). A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes. Genome Biology, 16(1). doi: 10.1186/s13059-015-0606-4. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/1nc2v4cj

Background Bread wheat is an allopolyploid species with a large, highly repetitive genome. To investigate the impact of selection on variants distributed among homoeologous wheat genomes and to build a foundation for understanding genotype-phenotype

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::07da369f74777b25af91f4226d96c74f