Effects of selection stringency on the outcomes of directed evolution.

Autor: Alpay, Berk A.^1,2 (AUTHOR), Desai, Michael M.^1,2,3 (AUTHOR) mdesai@oeb.harvard.edu

Publikováno v: PLoS ONE. 10/14/2024, Vol. 19 Issue 10, p1-16. 16p.

Unraveling the causes of adaptive benefits of synonymous mutations in TEM-1 β-lactamase.

Autor: Zwart MP; Institute for Theoretical Physics, University of Cologne, Cologne, Germany. m.zwart@nioo.knaw.nl.; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands. m.zwart@nioo.knaw.nl.; Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands. m.zwart@nioo.knaw.nl., Schenk MF; Institute for Theoretical Physics, University of Cologne, Cologne, Germany.; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands.; The Netherlands Food and Consumer Product Safety Authority, Utrecht, The Netherlands., Hwang S; Institute for Theoretical Physics, University of Cologne, Cologne, Germany.; LPTMS, Université Paris-Sud 11, UMR 8626 CNRS, Orsay Cedex, France., Koopmanschap B; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands., de Lange N; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands.; Physical Chemistry and Soft Matter, Wageningen University, Wageningen, The Netherlands., van de Pol L; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands.; Veluws College, Twello, The Netherlands., Nga TTT; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands.; Biomedic JSC, Hanoi, Vietnam., Szendro IG; Institute for Theoretical Physics, University of Cologne, Cologne, Germany., Krug J; Institute for Theoretical Physics, University of Cologne, Cologne, Germany., de Visser JAGM; Laboratory of Genetics, Wageningen University, Wageningen, The Netherlands.

Publikováno v: Heredity [Heredity (Edinb)] 2018 Nov; Vol. 121 (5), pp. 406-421. Date of Electronic Publication: 2018 Jul 02.

het-B allorecognition in Podospora anserina is determined by pseudo-allelic interaction of genes encoding a HET and lectin fold domain protein and a PII-like protein.

Autor: Clavé, Corinne¹ (AUTHOR), Dheur, Sonia¹ (AUTHOR), Ament-Velásquez, Sandra Lorena² (AUTHOR), Granger-Farbos, Alexandra¹ (AUTHOR), Saupe, Sven J.¹ (AUTHOR) sven.saupe@ibgc.cnrs.fr

Publikováno v: PLoS Genetics. 2/12/2024, Vol. 20 Issue 2, p1-26. 26p.

Role of pleiotropy during adaptation of TEM-1 β-lactamase to two novel antibiotics.

Autor: Schenk MF; Institute of Genetics, University of Cologne Köln, Germany ; Laboratory of Genetics, Wageningen University Wageningen, The Netherlands., Witte S; Laboratory of Genetics, Wageningen University Wageningen, The Netherlands., Salverda ML; Laboratory of Genetics, Wageningen University Wageningen, The Netherlands., Koopmanschap B; Laboratory of Genetics, Wageningen University Wageningen, The Netherlands., Krug J; Institute for Theoretical Physics, University of Cologne Köln, Germany ; Systems Biology of Ageing Cologne (Sybacol), University of Cologne Köln, Germany., de Visser JA; Laboratory of Genetics, Wageningen University Wageningen, The Netherlands.

Publikováno v: Evolutionary applications [Evol Appl] 2015 Mar; Vol. 8 (3), pp. 248-60. Date of Electronic Publication: 2014 Sep 18.

Signatures of kin selection in a natural population of the bacteria Bacillus subtilis.

Autor: Belcher, Laurence J.¹ laurence.belcher@biology.ox.ac.uk, Dewar, Anna E.¹, Chunhui Hao¹, Ghoul, Melanie¹, West, Stuart A.¹

Publikováno v: Evolution Letters. Oct2023, Vol. 7 Issue 5, p315-330. 16p.