A Multifactorial Approach for Surveillance of Shigella spp. and Entero-Invasive Escherichia coli Is Important for Detecting (Inter)national Clusters.

Autor: van den Beld MJC; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands.; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, Netherlands., Reubsaet FAG; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Pijnacker R; Infectious Diseases, Epidemiology and Surveillance, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Harpal A; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Kuiling S; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Heerkens EM; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Hoeve-Bakker BJAD; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Noomen RCEA; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Hendriks ACA; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Borst D; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., van der Heide H; Infectious Disease Research, Diagnostics and Laboratory Surveillance, Centre for Infectious disease Control, National Institute for Public Health and the Environment, Bilthoven, Netherlands., Kooistra-Smid AMDM; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.; Department of Medical Microbiology, Certe, Groningen, Netherlands., Rossen JWA; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.

Publikováno v: Frontiers in microbiology [Front Microbiol] 2020 Oct 19; Vol. 11, pp. 564103. Date of Electronic Publication: 2020 Oct 19 (Print Publication: 2020).

Incidence, clinical implications and impact on public health of infections with Shigella spp. and entero-invasive Escherichia coli (EIEC): results of a multicenter cross-sectional study in the Netherlands during 2016-2017.

Autor: van den Beld MJC; Infectious Disease Research, Diagnostics and laboratory Surveillance, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, The Netherlands. maaike.van.den.beld@rivm.nl.; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands. maaike.van.den.beld@rivm.nl., Warmelink E; Public health service GGD Groningen, Groningen, the Netherlands., Friedrich AW; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands., Reubsaet FAG; Infectious Disease Research, Diagnostics and laboratory Surveillance, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, The Netherlands., Schipper M; Department of Statistics, Informatics and Mathematical Modeling, National Institute for Public Health and the Environment (RIVM), Bilthoven, the Netherlands., de Boer RF; Certe, Department of Medical Microbiology, Groningen, the Netherlands., Notermans DW; Infectious Disease Research, Diagnostics and laboratory Surveillance, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, The Netherlands., Petrignani MWF; Public health service GGD Amsterdam, Amsterdam, the Netherlands.; National Coordination Centre for Communicable Disease Control, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, The Netherlands., van Zanten E; Certe, Department of Medical Microbiology, Groningen, the Netherlands., Rossen JWA; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands., Friesema IHM; Infectious Diseases, Epidemiology and Surveillance, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, the Netherlands., Kooistra-Smid AMDM; Department of Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.; Certe, Department of Medical Microbiology, Groningen, the Netherlands.

Publikováno v: BMC infectious diseases [BMC Infect Dis] 2019 Dec 09; Vol. 19 (1), pp. 1037. Date of Electronic Publication: 2019 Dec 09.

Development and Validation of a Reference Data Set for Assigning Staphylococcus Species Based on Next-Generation Sequencing of the 16S-23S rRNA Region.

Autor: Kosecka-Strojek M; Department of Microbiology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland.; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands., Sabat AJ; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands., Akkerboom V; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands., Becker K; Institute of Medical Microbiology, University Hospital Münster, Münster, Germany., van Zanten E; Certe, Department of Medical Microbiology, Groningen, Netherlands., Wisselink G; Certe, Department of Medical Microbiology, Groningen, Netherlands., Miedzobrodzki J; Department of Microbiology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland., Kooistra-Smid AMDM; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.; Certe, Department of Medical Microbiology, Groningen, Netherlands., Friedrich AW; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.

Publikováno v: Frontiers in cellular and infection microbiology [Front Cell Infect Microbiol] 2019 Aug 07; Vol. 9, pp. 278. Date of Electronic Publication: 2019 Aug 07 (Print Publication: 2019).

Targeted next-generation sequencing of the 16S-23S rRNA region for culture-independent bacterial identification - increased discrimination of closely related species.

Autor: Sabat AJ; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.; Department of Medical Microbiology, Certe, Groningen, The Netherlands., van Zanten E; Department of Medical Microbiology, Certe, Groningen, The Netherlands., Akkerboom V; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands., Wisselink G; Department of Medical Microbiology, Certe, Groningen, The Netherlands., van Slochteren K; Department of Medical Microbiology, Certe, Groningen, The Netherlands., de Boer RF; Department of Medical Microbiology, Certe, Groningen, The Netherlands., Hendrix R; Department of Medical Microbiology, Certe, Groningen, The Netherlands., Friedrich AW; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. alex.friedrich@umcg.nl., Rossen JWA; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands., Kooistra-Smid AMDM; Department of Medical Microbiology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.; Department of Medical Microbiology, Certe, Groningen, The Netherlands.

Publikováno v: Scientific reports [Sci Rep] 2017 Jun 13; Vol. 7 (1), pp. 3434. Date of Electronic Publication: 2017 Jun 13.