Global and single-cell proteomics view of the co-evolution between neural progenitors and breast cancer cells in a co-culture model.

Autor: Bjørnstad OV; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway., Carrasco M; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway., Finne K; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway., Ardawatia V; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway., Winge I; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway., Askeland C; Department of Pathology, Haukeland University Hospital, Bergen N-5021, Norway., Arnes JB; Department of Pathology, Haukeland University Hospital, Bergen N-5021, Norway., Knutsvik G; Department of Pathology, Haukeland University Hospital, Bergen N-5021, Norway., Kleftogiannis D; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway; Computational Biology Unit (CBU), Department of Informatics, University of Bergen, Bergen N-5021, Norway., Paulo JA; Computational Biology Unit (CBU), Department of Informatics, University of Bergen, Bergen N-5021, Norway; Department of Cell Biology, Harvard Medical School, Boston, MA, USA., Akslen LA; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway; Department of Pathology, Haukeland University Hospital, Bergen N-5021, Norway., Vethe H; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, Section for Pathology, University of Bergen, Bergen N-5021, Norway. Electronic address: Heidrun.Vethe@uib.no.

Publikováno v: EBioMedicine [EBioMedicine] 2024 Oct; Vol. 108, pp. 105325. Date of Electronic Publication: 2024 Sep 04.

LOCATOR: feature extraction and spatial analysis of the cancer tissue microenvironment using mass cytometry imaging technologies.

Autor: Ehsani R; Department of Informatics, Computational Biology Unit, University of Bergen, Bergen N-5020, Norway.; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, University of Bergen, Bergen N-5020, Norway., Jonassen I; Department of Informatics, Computational Biology Unit, University of Bergen, Bergen N-5020, Norway.; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, University of Bergen, Bergen N-5020, Norway., Akslen LA; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, University of Bergen, Bergen N-5020, Norway.; Department of Pathology, Haukeland University Hospital, Bergen N-5020, Norway., Kleftogiannis D; Department of Informatics, Computational Biology Unit, University of Bergen, Bergen N-5020, Norway.; Centre for Cancer Biomarkers CCBIO, Department of Clinical Medicine, University of Bergen, Bergen N-5020, Norway.

Publikováno v: Bioinformatics advances [Bioinform Adv] 2023 Oct 11; Vol. 3 (1), pp. vbad146. Date of Electronic Publication: 2023 Oct 11 (Print Publication: 2023).

Global and single-cell proteomics view of the co-evolution between neural progenitors and breast cancer cells in a co-culture model.

Autor: Bjørnstad OV, Carrasco M, Finne K, Winge I, Askeland C, Arnes JB, Knutsvik G, Kleftogiannis D, Paulo JA, Akslen LA, Vethe H

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2023 May 05. Date of Electronic Publication: 2023 May 05.

Author Correction: Early response evaluation by single cell signaling profiling in acute myeloid leukemia.

Autor: Tislevoll BS; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway., Hellesøy M; Department of Internal Medicine, Hematology Section, Haukeland University Hospital, Helse Bergen HF, Bergen, Norway., Fagerholt OHE; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway., Gullaksen SE; Department of Internal Medicine, Hematology Section, Haukeland University Hospital, Helse Bergen HF, Bergen, Norway., Srivastava A; Genome Core Facility, Clinical Laboratory, K2 Haukeland University Hospital, Bergen, Norway., Birkeland E; The Proteomics Facility of the University of Bergen (PROBE), University of Bergen, Bergen, Norway., Kleftogiannis D; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway.; Centre for Cancer Biomarkers and Computational Biology Unit, Department of Informatics, University of Bergen, Bergen, Norway., Ayuda-Durán P; Department of Molecular Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, 0379, Oslo, Norway.; Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, 0318, Oslo, Norway., Piechaczyk L; Department of Molecular Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, 0379, Oslo, Norway.; Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, 0318, Oslo, Norway.; Faculty of Medicine, University of Oslo, Oslo, Norway., Tadele DS; Department of Molecular Genetics, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.; Department of Translational Hematology and Oncology Research, Cleveland Clinic, OH, 44106, USA., Skavland J; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway., Baliakas P; Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden., Hovland R; Center for Medical Genetics and Molecular Medicine, Haukeland University Hospital, Bergen, Norway., Andresen V; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway., Seternes OM; Department of Pharmacy, UiT-The Arctic University of Norway, 9037, Tromsø, Norway., Tvedt THA; Department of Hematology, Oslo University Hospital, Oslo, Norway., Aghaeepour N; Department of Anesthesiology, Perioperative and Pain Medicine, Stanford University School of Medicine, Stanford, CA, 94121, USA.; Department of Pediatrics, Stanford University School of Medicine, Stanford, CA, 94121, USA.; Department of Biomedical Informatics, Stanford University School of Medicine, Stanford, CA, 94121, USA., Gavasso S; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway.; Centre for Clinical Treatment Research (NeuroSysMed), Department of Clinical Science, University of Bergen, Bergen, Norway., Porkka K; Department of Hematology, Helsinki University Hospital Comprehensive Cancer Center, Helsinki, Finland., Jonassen I; Centre for Cancer Biomarkers and Computational Biology Unit, Department of Informatics, University of Bergen, Bergen, Norway., Fløisand Y; Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, 0318, Oslo, Norway.; Department of Hematology, Oslo University Hospital, Oslo, Norway., Enserink J; Department of Molecular Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, 0379, Oslo, Norway.; Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, 0318, Oslo, Norway.; Section for Biochemistry and Molecular Biology, Faculty of Mathematics and Natural Sciences, University of Oslo, 0037, Oslo, Norway., Blaser N; Department of Informatics, University of Bergen, Bergen, Norway. nello.blaser@uib.no., Gjertsen BT; Centre for Cancer Biomarkers (CCBIO), Department of Clinical Science, University of Bergen, Bergen, Norway. bjorn.gjertsen@uib.no.; Department of Internal Medicine, Hematology Section, Haukeland University Hospital, Helse Bergen HF, Bergen, Norway. bjorn.gjertsen@uib.no.

Publikováno v: Nature communications [Nat Commun] 2023 Mar 30; Vol. 14 (1), pp. 1767. Date of Electronic Publication: 2023 Mar 30.

Development, application and evaluation of a 1-D full life cycle anchovy and sardine model for the North Aegean Sea (Eastern Mediterranean)

Autor: Gkanasos, A. Somarakis, S. Tsiaras, K. Kleftogiannis, D. Giannoulaki, M. Schismenou, E. Sofianos, S. Triantafyllou, G.

A 1-D full-life-cycle, Individual-based model (IBM), two-way coupled with a hydrodynamic/ biogeochemical model, is demonstrated for anchovy and sardine in the N. Aegean Sea (Eastern Mediterranean). The model is stage-specific and includes a ‘Wiscon

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______2127::1324ce24390a2fe201654582be9f9863
https://pergamos.lib.uoa.gr/uoa/dl/object/uoadl:3056498