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Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample.

Autor: Sandoval-Velasco M; Center for Evolutionary Hologenomics, University of Copenhagen, DK-1353 Copenhagen, Denmark., Dudchenko O; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA. Electronic address: olga.dudchenko@bcm.edu., Rodríguez JA; Center for Evolutionary Hologenomics, University of Copenhagen, DK-1353 Copenhagen, Denmark; Centre Nacional d'Anàlisi Genòmica, CNAG, 08028 Barcelona, Spain., Pérez Estrada C; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA., Dehasque M; Centre for Palaeogenetics, SE-106 91 Stockholm, Sweden; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, 10405 Stockholm, Sweden; Department of Zoology, Stockholm University, SE-106 91 Stockholm, Sweden., Fontsere C; Center for Evolutionary Hologenomics, University of Copenhagen, DK-1353 Copenhagen, Denmark., Mak SST; Center for Evolutionary Hologenomics, University of Copenhagen, DK-1353 Copenhagen, Denmark., Khan R; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Contessoto VG; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA., Oliveira Junior AB; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA., Kalluchi A; Department of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, NE 68198, USA., Zubillaga Herrera BJ; Department of Physics, Northeastern University, Boston, MA 02115, USA; Center for Theoretical Biological Physics, Northeastern University, Boston, MA 02215, USA., Jeong J; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Roy RP; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA; Departments of Biology and Physics, Texas Southern University, Houston, TX 77004, USA., Christopher I; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Weisz D; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Omer AD; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Batra SS; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Shamim MS; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Durand NC; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., O'Connell B; Department of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA 95064, USA; Department of Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR 97239, USA., Roca AL; Department of Animal Sciences and Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA., Plikus MV; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA., Kusliy MA; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Romanenko SA; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Lemskaya NA; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Serdyukova NA; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Modina SA; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Perelman PL; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Kizilova EA; Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia., Baiborodin SI; Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia., Rubtsov NB; Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia., Machol G; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Rath K; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Mahajan R; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA; Department of Biosciences, Rice University, Houston, TX 77005, USA., Kaur P; UWA School of Agriculture and Environment, University of Western Australia, Perth, WA 6009, Australia., Gnirke A; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Garcia-Treviño I; San Antonio Zoo, San Antonio, TX 78212, USA., Coke R; San Antonio Zoo, San Antonio, TX 78212, USA., Flanagan JP; Houston Zoo, Houston, TX 77030, USA., Pletch K; Houston Zoo, Houston, TX 77030, USA., Ruiz-Herrera A; Departament de Biologia Cel·lular, Fisiologia i Immunologia and Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallès, Spain., Plotnikov V; Academy of Sciences of Sakha Republic, Yakutsk 677000, Russia., Pavlov IS; Academy of Sciences of Sakha Republic, Yakutsk 677000, Russia., Pavlova NI; Institute of Biological Problems of Cryolitezone SB RAS, Yakutsk 677000, Russia., Protopopov AV; Academy of Sciences of Sakha Republic, Yakutsk 677000, Russia; North-Eastern Federal University, Yakutsk 677027, Russia., Di Pierro M; Department of Physics, Northeastern University, Boston, MA 02115, USA; Center for Theoretical Biological Physics, Northeastern University, Boston, MA 02215, USA., Graphodatsky AS; Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia., Lander ES; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Systems Biology, Harvard Medical School, Boston, MA 02115, USA; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Rowley MJ; Department of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, NE 68198, USA., Wolynes PG; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA; Department of Biosciences, Rice University, Houston, TX 77005, USA; Departments of Physics, Astronomy, & Chemistry, Rice University, Houston, TX 77005, USA., Onuchic JN; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA; Department of Biosciences, Rice University, Houston, TX 77005, USA; Departments of Physics, Astronomy, & Chemistry, Rice University, Houston, TX 77005, USA., Dalén L; Centre for Palaeogenetics, SE-106 91 Stockholm, Sweden; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, 10405 Stockholm, Sweden; Department of Zoology, Stockholm University, SE-106 91 Stockholm, Sweden., Marti-Renom MA; Centre Nacional d'Anàlisi Genòmica, CNAG, 08028 Barcelona, Spain; Centre for Genomic Regulation, The Barcelona Institute for Science and Technology, 08003 Barcelona, Spain; ICREA, 08010 Barcelona, Spain; Universitat Pompeu Fabra, 08002 Barcelona, Spain. Electronic address: martirenom@cnag.eu., Gilbert MTP; Center for Evolutionary Hologenomics, University of Copenhagen, DK-1353 Copenhagen, Denmark; University Museum NTNU, 7012 Trondheim, Norway. Electronic address: tgilbert@sund.ku.dk., Aiden EL; The Center for Genome Architecture and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. Electronic address: erez@erez.com.

Publikováno v: Cell [Cell] 2024 Jul 11; Vol. 187 (14), pp. 3541-3562.e51.

Homogeneously Staining Regions (HSR) in Chromosome 1 of the House Mouse: Synapsis and Recombination at Meiosis.

Autor: Torgunakov NY; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.; Novosibirsk State University, Novosibirsk, Russian Federation., Kizilova EA; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.; Novosibirsk State University, Novosibirsk, Russian Federation., Karamysheva TV; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation., Malinovskaya LP; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.; Novosibirsk State University, Novosibirsk, Russian Federation., Bikchurina TI; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.; Novosibirsk State University, Novosibirsk, Russian Federation., Borodin PM; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation, borodin@bionet.nsc.ru.; Novosibirsk State University, Novosibirsk, Russian Federation, borodin@bionet.nsc.ru.

Publikováno v: Cytogenetic and genome research [Cytogenet Genome Res] 2021; Vol. 161 (1-2), pp. 14-22. Date of Electronic Publication: 2021 Mar 16.

Generation of GABAergic striatal neurons by a novel iPSC differentiation protocol enabling scalability and cryopreservation of progenitor cells.

Autor: Grigor'eva EV; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090. evlena@bionet.nsc.ru., Malankhanova TB; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Surumbayeva A; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Pavlova SV; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Minina JM; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Kizilova EA; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Suldina LA; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Morozova KN; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Kiseleva E; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Sorokoumov ED; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Lebedev IN; Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, 5 Kooperativny Str, Tomsk, Russian Federation, 634050., Zakian SM; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090., Malakhova AA; Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences, 10 Lavrentiev Ave, Novosibirsk, Russian Federation, 630090.

Publikováno v: Cytotechnology [Cytotechnology] 2020 Oct; Vol. 72 (5), pp. 649-663. Date of Electronic Publication: 2020 Jun 09.

Targeted genomic integration of EGFP under tubulin beta 3 class III promoter and mEos2 under tryptophan hydroxylase 2 promoter does not produce sufficient levels of reporter gene expression.

Autor: Menzorov AG; Department of Molecular Mechanisms of Development, Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia., Orishchenko KE; Laboratory of Molecular Genetic Technologies of the Institute for Living Systems, Immanuel Kant Baltic Federal University, Kaliningrad, Russia.; Cell Biology Department, Institute of Cytology and Genetics of the Russian Academy of Sciences, Novosibirsk, Russia., Fishman VS; Department of Molecular Mechanisms of Development, Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia., Shevtsova AA; Department of Molecular Mechanisms of Development, Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia., Mungalov RV; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia., Pristyazhnyuk IE; Department of Molecular Mechanisms of Development, Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia., Kizilova EA; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia.; Cell Biology Department, Institute of Cytology and Genetics of the Russian Academy of Sciences, Novosibirsk, Russia., Matveeva NM; Department of Molecular Mechanisms of Development, Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia., Alenina N; Laboratory of Molecular Biology of Peptide Hormones, Max Delbrück Center for Molecular Medicine, Berlin, Germany., Bader M; Laboratory of Molecular Biology of Peptide Hormones, Max Delbrück Center for Molecular Medicine, Berlin, Germany., Rubtsov NB; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia.; Cell Biology Department, Institute of Cytology and Genetics of the Russian Academy of Sciences, Novosibirsk, Russia., Serov OL; Department of Molecular Mechanisms of Development, Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, Russia.

Publikováno v: Journal of cellular biochemistry [J Cell Biochem] 2019 Oct; Vol. 120 (10), pp. 17208-17218. Date of Electronic Publication: 2019 May 20.