Zobrazeno 1 - 10
of 56
pro vyhledávání: '"Kirill S Korolev"'
Autor:
Ashish B George, Kirill S Korolev
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 1, p e1010570 (2023)
Assembling optimal microbial communities is key for various applications in biofuel production, agriculture, and human health. Finding the optimal community is challenging because the number of possible communities grows exponentially with the number
Externí odkaz:
https://doaj.org/article/d4551f8ecf73400b9415ef58ae85cf66
Autor:
Ashish B George, Kirill S Korolev
Publikováno v:
PLoS Computational Biology, Vol 14, Iss 12, p e1006645 (2018)
Chirality in shape and motility can evolve rapidly in microbes and cancer cells. To determine how chirality affects cell fitness, we developed a model of chiral growth in compact aggregates such as microbial colonies and solid tumors. Our model recap
Externí odkaz:
https://doaj.org/article/de2567e6b0764229a23a6df74b4e9ae8
Publikováno v:
PLoS Computational Biology, Vol 14, Iss 1, p e1005939 (2018)
Microbiota contribute to many dimensions of host phenotype, including disease. To link specific microbes to specific phenotypes, microbiome-wide association studies compare microbial abundances between two groups of samples. Abundance differences, ho
Externí odkaz:
https://doaj.org/article/ce8bb338b47143a593fa562b0f9ad2ba
Publikováno v:
New Journal of Physics, Vol 22, Iss 8, p 083034 (2020)
Self-activation coupled to a transport mechanism results in traveling waves that describe polymerization reactions, forest fires, tumor growth, and even the spread of epidemics. Diffusion is a simple and commonly used model of particle transport. Man
Externí odkaz:
https://doaj.org/article/f578b839755640728f9790202f691691
Publikováno v:
eLife, Vol 5 (2016)
Microtubule asters - radial arrays of microtubules organized by centrosomes - play a fundamental role in the spatial coordination of animal cells. The standard model of aster growth assumes a fixed number of microtubules originating from the centroso
Externí odkaz:
https://doaj.org/article/2f70e3af3f45429d83ac75664ebe74c7
Autor:
Kirill S Korolev
Publikováno v:
PLoS Computational Biology, Vol 9, Iss 3, p e1002994 (2013)
Species expand their geographical ranges following an environmental change, long range dispersal, or a new adaptation. Range expansions not only bring an ecological change, but also affect the evolution of the expanding species. Although the dynamics
Externí odkaz:
https://doaj.org/article/74e9aa55c7a640f496f2dc5d5d0e6d8e
A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS)
Autor:
Michael Quintin, Ilija Dukovski, Alvaro Sanchez, Kirill S. Korolev, Daniel Segrè, Alan R. Pacheco, Djordje Bajić, Snorre Sulheim, David B. Bernstein, Jean C. C. Vila, William R. Harcombe, Jeremy M. Chacón, William J. Riehl
Publikováno v:
Nature Protocols. 16:5030-5082
Genome-scale stoichiometric modeling of metabolism has become a standard systems biology tool for modeling cellular physiology and growth. Extensions of this approach are emerging as a valuable avenue for predicting, understanding and designing micro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a3c6941fc7ccc669d8f63e7f9ca63682
https://doi.org/10.1038/s41596-021-00593-3
https://doi.org/10.1038/s41596-021-00593-3
Autor:
Asaad A Assiri, Harland S. Winter, Kirill S. Korolev, Mohammad I. El Mouzan, Ahmed Al Sarkhy, Rajita Menon
Publikováno v:
Saudi Journal of Gastroenterology : Official Journal of the Saudi Gastroenterology Association
The Saudi Journal of Gastroenterology, Vol 27, Iss 3, Pp 144-148 (2021)
The Saudi Journal of Gastroenterology, Vol 27, Iss 3, Pp 144-148 (2021)
Background: Studies have reached different conclusions regarding the accuracy of dysbiosis in predicting the diagnosis of Crohn's disease (CD). The aim of this report is to assess the utility of mucosal and fecal microbial dysbiosis as predictors in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b13f2b84bad21826fb0367cae82ca5a7
http://europepmc.org/articles/PMC8265402
http://europepmc.org/articles/PMC8265402
Cellular aggregates assume an incredible variety of shapes ranging from circular molds to irregular tumors. While we understand many of the mechanisms responsible for these spatial patterns, little is known about how the shape of an aggregate influen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::75d4ad0f9f50fbbc6c08416504cda2f3
https://doi.org/10.1101/2022.03.28.486080
https://doi.org/10.1101/2022.03.28.486080
Publikováno v:
Physical biology. 19(5)
Cellular populations assume an incredible variety of shapes ranging from circular molds to irregular tumors. While we understand many of the mechanisms responsible for these spatial patterns, little is known about how the shape of a population influe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::10240cb3246771a8864a9dabfad18c8e
https://pubmed.ncbi.nlm.nih.gov/35901792
https://pubmed.ncbi.nlm.nih.gov/35901792