Multi-omic profiling reveals early immunological indicators for identifying COVID-19 Progressors

Autor: Drake, Katherine A., Talantov, Dimitri, Tong, Gary J., Lin, Jack T., Verheijden, Simon, Katz, Samuel, Leung, Jacqueline M., Yuen, Benjamin, Krishna, Vinod, Wu, Michelle J., Sutherland, Alexander M., Short, Sarah A., Kheradpour, Pouya, Mumbach, Maxwell R., Franz, Kate M., Trifonov, Vladimir, Lucas, Molly V., Merson, James, Kim, Charles C., Chen, Chen, Parthasarathy, Sairam, Tapson, Victor F., Moy, James N., de Filippi, Christopher R., Rosas, Ivan O., Basit, Mujeeb, Salvatore, Mirella, Krishnan, Jerry A.

Publikováno v: In Clinical Immunology November 2023 256

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Additional file 2 of Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets

Autor: Guo, Michael H., Sama, Prashanth, LaBarre, Brenna A., Lokhande, Hrishikesh, Balibalos, John, Chu, Ci, Du, Xiaomi, Kheradpour, Pouya, Kim, Charles C., Oniskey, Taylor, Snyder, Thomas, Soghoian, Damien Z., Weiner, Howard L., Chitnis, Tanuja, Patsopoulos, Nikolaos A.

Additional file 2: Supplementary Figures. Figure S1. Correlation in ATAC-seq profiles across hematopoietic cell types. Figure S2. LDSC enrichments for MS GWAS in cell-type specific ATAC-seq peaks mature hematopoietic cell type. Figure S3. Enrichments

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad58734655bf1fc414be98e19c9ba8b4

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Autor: The modeENCODE Consortium, Roy, Sushmita, Ernst, Jason, Kharchenko, Peter V., Kheradpour, Pouya, Negre, Nicolas, Eaton, Matthew L., Landolin, Jane M., Bristow, Christopher A., Ma, Lijia, Lin, Michael F., Washietl, Stefan, Arshinoff, Bradley I., Ay, Ferhat, Meyer, Patrick E., Robine, Nicolas, Washington, Nicole L., Di Stefano, Luisa, Berezikov, Eugene, Brown, Christopher D., Candeias, Rogerio, Carlson, Joseph W., Carr, Adrian, Jungreis, Irwin, Marbach, Daniel, Sealfon, Rachel, Tolstorukov, Michael Y., Will, Sebastian, Alekseyenko, Artyom A., Artieri, Carlo, Booth, Benjamin W., Brooks, Angela N., Dai, Qi, Davis, Carrie A., Duff, Michael O., Feng, Xin, Gorchakov, Andrey A., Gu, Tingting, Henikoff, Jorja G., Kapranov, Philipp, Li, Renhua, MacAlpine, Heather K., Malone, John, Minoda, Aki, Nordman, Jared, Okamura, Katsutomo, Perry, Marc, Powell, Sara K., Riddle, Nicole C., Sakai, Akiko, Samsonova, Anastasia, Sandler, Jeremy E., Schwartz, Yuri B., Sher, Noa, Spokony, Rebecca, Sturgill, David, van Baren, Marijke, Wan, Kenneth H., Yang, Li, Yu, Charles, Feingold, Elise, Good, Peter, Guyer, Mark, Lowdon, Rebecca, Ahmad, Kami, Andrews, Justen, Berger, Bonnie, Brenner, Steven E., Brent, Michael R., Cherbas, Lucy, Elgin, Sarah C. R., Gingeras, Thomas R., Grossman, Robert, Hoskins, Roger A., Kaufman, Thomas C., Kent, William, Kuroda, Mitzi I., Orr-Weaver, Terry, Perrimon, Norbert, Pirrotta, Vincenzo, Posakony, James W., Ren, Bing, Russell, Steven, Cherbas, Peter, Graveley, Brenton R., Lewis, Suzanna, Micklem, Gos, Oliver, Brian, Park, Peter J., Celniker, Susan E., Henikoff, Steven, Karpen, Gary H., Lai, Eric C., MacAlpine, David M., Stein, Lincoln D., White, Kevin P., Kellis, Manolis

Publikováno v: Science, 2010 Dec . 330(6012), 1787-1797.

Externí odkaz: https://www.jstor.org/stable/40986582

Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets.

Autor: Guo, Michael H., Sama, Prashanth, LaBarre, Brenna A., Lokhande, Hrishikesh, Balibalos, John, Chu, Ci, Du, Xiaomi, Kheradpour, Pouya, Kim, Charles C., Oniskey, Taylor, Snyder, Thomas, Soghoian, Damien Z., Weiner, Howard L., Chitnis, Tanuja, Patsopoulos, Nikolaos A.

Publikováno v: Genome Biology; 6/7/2022, Vol. 23 Issue 1, p1-23, 23p