Výsledky vyhledávání - "Khazneh, Hassan"

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Additional file 8 of Much ado about nothing? Off-target amplification can lead to false-positive bacterial brain microbiome detection in healthy and Parkinson’s disease individuals

Autor: Bedarf, Janis R., Naiara Beraza, Khazneh, Hassan, Özkurt, Ezgi, Baker, David, Borger, Valeri, Wüllner, Ullrich, Hildebrand, Falk

Additional file 7: Suppl. Figure 7. Classification of remaining and manually re-analysed zOTUs. The 75 zOTUs that remained in the analysis after automatic off-target removal and automatic contamination removal were discovered to be off-target amplico

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Additional file 2 of Much ado about nothing? Off-target amplification can lead to false-positive bacterial brain microbiome detection in healthy and Parkinson’s disease individuals

Autor: Bedarf, Janis R., Naiara Beraza, Khazneh, Hassan, Özkurt, Ezgi, Baker, David, Borger, Valeri, Wüllner, Ullrich, Hildebrand, Falk

Additional file 1: Suppl. Figure 1. Off target amplicons and contaminants in study samples. A: Off target amplicons were most abundant in murine samples. B: PK2 DNA extraction (contaminant prone) in putamen samples resulted in significantly more cont

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::23973e0c85ced8120bedb5a18e0f138d

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Additional file 4 of Much ado about nothing? Off-target amplification can lead to false-positive bacterial brain microbiome detection in healthy and Parkinson’s disease individuals

Autor: Bedarf, Janis R., Naiara Beraza, Khazneh, Hassan, Özkurt, Ezgi, Baker, David, Borger, Valeri, Wüllner, Ullrich, Hildebrand, Falk

Additional file 3: Suppl. Figure 3. Heatmap of removed contaminants. Heatmap of the relative abundance of zOTUs (contaminants and off-target amplicons) that were removed from downstream analysis. #: contaminant categories, number of computational con

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::089be176a1d77c92ecf621c6fd916951

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Additional file 3 of Much ado about nothing? Off-target amplification can lead to false-positive bacterial brain microbiome detection in healthy and Parkinson’s disease individuals

Autor: Bedarf, Janis R., Naiara Beraza, Khazneh, Hassan, Özkurt, Ezgi, Baker, David, Borger, Valeri, Wüllner, Ullrich, Hildebrand, Falk

Additional file 2: Suppl. Figure 2. Mock community and 16S rRNA gene copy number correlations. A: Log16S rRNA gene copy number in mock samples corresponding to the theoretical values. The theoretical values were calculated based on the cell concentra

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Additional file 6 of Much ado about nothing? Off-target amplification can lead to false-positive bacterial brain microbiome detection in healthy and Parkinson’s disease individuals

Autor: Bedarf, Janis R., Naiara Beraza, Khazneh, Hassan, Özkurt, Ezgi, Baker, David, Borger, Valeri, Wüllner, Ullrich, Hildebrand, Falk

Additional file 5: Suppl. Figure 5. Negative controls. Taxonomic composition (genus level) of negative controls normalized by 16S rRNA gene copy number; further analysis showed 99% of all zOTUs in negative control samples were attributable to contami

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad6c0ac7e9868b467b2a97146eeac2ff

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