Zobrazeno 1 - 10
of 26
pro vyhledávání: '"Kershner, Jamie"'
Autor:
Herbert, Zachary, Kershner, Jamie, Butty, Vincent, Jyothi Thimmapuram, Sulbha Choudhari, Alekseyev, Yuriy, Fan, Jun, Podnar, Jessica, Wilcox, Edward, Gipson, Jenny, Gillaspy, Allison, Jepsen, Kristen, BonDurant, Sandra, Krystalynne Morris, Berkeley, Maura, LeClerc, Ashley, Simpson, Stephen, Sommerville, Gary, Grimmett, Leslie, Adams, Marie, Levine, Stuart
Figure S4. Fraction of reads mapping to each ERCC mRNA is shown for each replicate. Light horizontal lines show 2-fold changes in fraction observed (log scale). Each expected concentration is shown in a different color. Data sets ordered by intact/de
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::140306917b633e94d7089119471dc2ad
Autor:
Herbert, Zachary, Kershner, Jamie, Butty, Vincent, Jyothi Thimmapuram, Sulbha Choudhari, Alekseyev, Yuriy, Fan, Jun, Podnar, Jessica, Wilcox, Edward, Gipson, Jenny, Gillaspy, Allison, Jepsen, Kristen, BonDurant, Sandra, Krystalynne Morris, Berkeley, Maura, LeClerc, Ashley, Simpson, Stephen, Sommerville, Gary, Grimmett, Leslie, Adams, Marie, Levine, Stuart
Contains the following: Describes normalization of kit protocols and any individual site deviations from this normalization. Figure S1. – BioAnalyzer traces for samples used in the study. Left: Intact UHR, Right: Heat degraded UHR RNA. Figure S2.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1860a65c1b3f0dd72136773da944995c
Autor:
Herbert, Zachary, Kershner, Jamie, Butty, Vincent, Jyothi Thimmapuram, Sulbha Choudhari, Alekseyev, Yuriy, Fan, Jun, Podnar, Jessica, Wilcox, Edward, Gipson, Jenny, Gillaspy, Allison, Jepsen, Kristen, BonDurant, Sandra, Krystalynne Morris, Berkeley, Maura, LeClerc, Ashley, Simpson, Stephen, Sommerville, Gary, Grimmett, Leslie, Adams, Marie, Levine, Stuart
Figure S2. Clustering of differentially detected genes. Top 50 most differentially detected genes, as measured by variance of log2RPKM across all samples, were clustered based on their differential expression. TOP: Hierarchical tree of clustering bas
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad26cf714fcaf75f685183440ee33036
Autor:
Herbert, Zachary, Kershner, Jamie, Butty, Vincent, Jyothi Thimmapuram, Sulbha Choudhari, Alekseyev, Yuriy, Fan, Jun, Podnar, Jessica, Wilcox, Edward, Gipson, Jenny, Gillaspy, Allison, Jepsen, Kristen, BonDurant, Sandra, Krystalynne Morris, Berkeley, Maura, LeClerc, Ashley, Simpson, Stephen, Sommerville, Gary, Grimmett, Leslie, Adams, Marie, Levine, Stuart
Figure S3. Insert size distribution for RNAseq libraries from intact RNA. The insert size for each library passing the 50% rRNA filter was calculated for reads with convergent reads that were separated by
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1cbaa390d2e9ea3125f1b5a12218785c
Autor:
Herbert, Zachary, Kershner, Jamie, Butty, Vincent, Jyothi Thimmapuram, Sulbha Choudhari, Alekseyev, Yuriy, Fan, Jun, Podnar, Jessica, Wilcox, Edward, Gipson, Jenny, Gillaspy, Allison, Jepsen, Kristen, BonDurant, Sandra, Krystalynne Morris, Berkeley, Maura, LeClerc, Ashley, Simpson, Stephen, Sommerville, Gary, Grimmett, Leslie, Adams, Marie, Levine, Stuart
Figure S1. BioAnalyzer traces for samples used in the study. Left: Intact UHR, Right: Heat degraded UHR RNA. (PPTX 127Â kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::175873692817b14c8af95b14e00fca4d
Autor:
Herbert, Zachary T., Thimmapuram, Jyothi, Shaojun Xie, Kershner, Jamie P., Kolling, Fred W., Ringelberg, Carol S., LeClerc, Ashley, Alekseyev, Yuriy O., Jun Fan, Podnar, Jessica W., Stevenson, Holly S., Sommerville, Gary, Gupta, Shipra, Berkeley, Maura, Koeman, Julie, Perera, Anoja, Scott, Allison R., Grenier, Jennifer K., Malik, Jeffrey, Ashton, John M.
Publikováno v:
Journal of Biomolecular Techniques; Jul2020, Vol. 31 Issue 2, p47-56, 10p
Autor:
Kim, Juhan1,2 (AUTHOR), Kershner, Jamie P1,2 (AUTHOR), Novikov, Yehor1,2 (AUTHOR), Shoemaker, Richard K3 (AUTHOR), Copley, Shelley D1,2 (AUTHOR)
Publikováno v:
Molecular Systems Biology. 2010, Vol. 6 Issue 1, p1-N.PAG. 13p. 1 Black and White Photograph, 3 Diagrams, 4 Charts, 1 Graph.
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