Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Keng Cher Soh"'
Autor:
Ljubisa Miskovic, Susanne Alff-Tuomala, Keng Cher Soh, Dorothee Barth, Laura Salusjärvi, Juha-Pekka Pitkänen, Laura Ruohonen, Merja Penttilä, Vassily Hatzimanikatis
Publikováno v:
Biotechnology for Biofuels, Vol 10, Iss 1, Pp 1-19 (2017)
Abstract Background Recent advancements in omics measurement technologies have led to an ever-increasing amount of available experimental data that necessitate systems-oriented methodologies for efficient and systematic integration of data into consi
Externí odkaz:
https://doaj.org/article/c9652f4332db4734b2878d12ad75ef70
Autor:
Keng Cher Soh, Meriç Ataman, Vassily Hatzimanikatis, Georgios Fengos, Thomas Pathier, Pierre Salvy
Publikováno v:
Bioinformatics
Summary pyTFA and matTFA are the first published implementations of the original TFA paper. Specifically, they include explicit formulation of Gibbs energies and metabolite concentrations, which enables straightforward integration of metabolite conce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::997b56d64e99ebb65aaaf893f4257c08
https://pubmed.ncbi.nlm.nih.gov/30561545
https://pubmed.ncbi.nlm.nih.gov/30561545
Autor:
Ljubisa, Miskovic, Susanne, Alff-Tuomala, Keng Cher, Soh, Dorothee, Barth, Laura, Salusjärvi, Juha-Pekka, Pitkänen, Laura, Ruohonen, Merja, Penttilä, Vassily, Hatzimanikatis
Publikováno v:
Biotechnology for Biofuels
Background Recent advancements in omics measurement technologies have led to an ever-increasing amount of available experimental data that necessitate systems-oriented methodologies for efficient and systematic integration of data into consistent lar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::1150a1b22ada92144d4b9d58a23d8e3e
https://pubmed.ncbi.nlm.nih.gov/28674555
https://pubmed.ncbi.nlm.nih.gov/28674555
Publikováno v:
Biotechnology Journal
Mathematical modeling is an essential tool for the comprehensive understanding of cell metabolism and its interactions with the environmental and process conditions. Recent developments in the construction and analysis of stoichiometric models made i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb3f01bbc61b580ecee6a1965f3e4833
Publikováno v:
Biotechnology journal. 12(1)
Reaction atom mappings track the positional changes of all of the atoms between the substrates and the products as they undergo the biochemical transformation. However, information on atom transitions in the context of metabolic pathways is not widel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::da612097c32428b440fb274fbf64526c
https://pubmed.ncbi.nlm.nih.gov/27897385
https://pubmed.ncbi.nlm.nih.gov/27897385
Autor:
Vassily Hatzimanikatis, Keng Cher Soh
Publikováno v:
Trends in Biotechnology
Metabolic networks have been studied for several decades, and sophisticated computational frameworks are needed to augment experimental approaches to harness these complex networks. BNICE (Biochemical Network Integrated Computational Explorer), a com
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::775dda92b9a9338b4de787bd4fe539ad
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1191
Flux balance analysis of stoichiometric metabolic models has become one of the most common methods for estimating intracellular fluxes. However most of these networks are underdetermined and can have multiple alternate optimal flux distributions. The
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::9d7e1a04200c16bde73627c6fd683f39
https://pubmed.ncbi.nlm.nih.gov/25178783
https://pubmed.ncbi.nlm.nih.gov/25178783
Autor:
Vassily Hatzimanikatis, Keng Cher Soh
Publikováno v:
Methods in Molecular Biology ISBN: 9781493911691
Flux balance analysis of stoichiometric metabolic models has become one of the most common methods for estimating intracellular fluxes. However most of these networks are underdetermined and can have multiple alternate optimal flux distributions. The
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9fd08c02658fc59e45e52034ca744693
Autor:
Marianne Seijo, Keng Cher Soh, Vassily Hatzimanikatis, Xue Li Guan, Noushin Hadadi, Aikaterini Zisaki, Markus R. Wenk
Publikováno v:
Metabolic engineering
Lipids are important compounds for human physiology and as renewable resources for fuels and chemicals. In lipid research, there is a big gap between the currently available pathway-level representations of lipids and lipid structure databases in whi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d6e7340bbe40d9aaab4c8de23c053900
https://pubmed.ncbi.nlm.nih.gov/24395008
https://pubmed.ncbi.nlm.nih.gov/24395008
Autor:
Miskovic, Ljubisa, Alff-Tuomala, Susanne, Keng Cher Soh, Barth, Dorothee, Salusjärvi, Laura, Pitkänen, Juha-Pekka, Ruohonen, Laura, Penttilä, Merja, Hatzimanikatis, Vassily
Publikováno v:
Biotechnology for Biofuels; 6/26/2017, Vol. 10, p1-19, 19p