Zobrazeno 1 - 10
of 92
pro vyhledávání: '"Ken Youens-Clark"'
Autor:
Mónica D. Ramírez-Andreotta, Ramona Walls, Ken Youens-Clark, Kai Blumberg, Katherine E. Isaacs, Dorsey Kaufmann, Raina M. Maier
Publikováno v:
Frontiers in Sustainable Food Systems, Vol 5 (2021)
Environmental contamination is a fundamental determinant of health and well-being, and when the environment is compromised, vulnerabilities are generated. The complex challenges associated with environmental health and food security are influenced by
Externí odkaz:
https://doaj.org/article/c8d843b152d34aecb6a8c455bfd50845
Autor:
George S Watts, James E Thornton, Ken Youens-Clark, Alise J Ponsero, Marvin J Slepian, Emmanuel Menashi, Charles Hu, Wuquan Deng, David G Armstrong, Spenser Reed, Lee D Cranmer, Bonnie L Hurwitz
Publikováno v:
PLoS Computational Biology, Vol 15, Iss 11, p e1006863 (2019)
Infections are a serious health concern worldwide, particularly in vulnerable populations such as the immunocompromised, elderly, and young. Advances in metagenomic sequencing availability, speed, and decreased cost offer the opportunity to supplemen
Externí odkaz:
https://doaj.org/article/a45dc5c6d5854b179b7341d782e0bba9
Autor:
Samuel E. Fox, Justin Preece, Jeffrey A. Kimbrel, Gina L. Marchini, Abigail Sage, Ken Youens-Clark, Mitchell B. Cruzan, Pankaj Jaiswal
Publikováno v:
Applications in Plant Sciences, Vol 1, Iss 3, p 1200011 (2013)
Premise of the study: We report the de novo assembly and characterization of the transcriptomes of Brachypodium sylvaticum (slender false-brome) accessions from native populations of Spain and Greece, and an invasive population west of Corvallis, Ore
Externí odkaz:
https://doaj.org/article/d86ccd7ed3a74fa3978bab5d8d5ed114
Autor:
Katherine B. Louie, Juying Yan, Jasmyn Pangilinan, Catherine Adam, Stephen J Mondo, Kurt LaButti, Jana M. U'Ren, Ken Youens-Clark, François Lutzoni, Moore Lp, Richard C. Hamelin, Grigoriev, Bill Andreopoulos, Mario Emilio Ernesto Franco, Bernard Henrissat, Mojgan Amirebrahimi, Ju Y, Zachary Konkel, Jennifer H. Wisecaver, Sajeet Haridas, Elodie Drula, Anna Lipzen, A. E. Arnold, Daniel C. Eastwood, Jolanta Miadlikowska, Eastman Ke, Alan Kuo, Hsieh H, Richard D. Hayes, Kelsey Scott, Keymanesh K, Steven Ahrendt, Jason C. Slot, Robert Riley, Trent R. Northen
Global, large-scale surveys of phylogenetically diverse plant and lichen hosts have revealed an extremely high richness of endophytes in the Xylariales, one of the largest clades of filamentous fungi and a significant source of novel secondary metabo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ffc432211a1e2799578c323275dd9649
https://doi.org/10.1101/2021.06.01.446356
https://doi.org/10.1101/2021.06.01.446356
Autor:
Nina M. Herz, Alise J. Ponsero, Kai Blumberg, Edward F. DeLong, Matthew Bomhoff, Elisha M. Wood-Charlson, Bonnie L. Hurwitz, Ken Youens-Clark
Publikováno v:
Nucleic Acids Research
In recent years, large-scale oceanic sequencing efforts have provided a deeper understanding of marine microbial communities and their dynamics. These research endeavors require the acquisition of complex and varied datasets through large, interdisci
Publikováno v:
Virus Evolution
High-throughput sequencing technologies provide unprecedented power to identify novel viruses from a wide variety of (environmental) samples. The field of ‘viral metagenomics’ has dramatically expanded our understanding of viral diversity. Viral
Autor:
George S. Watts, Gregory S. Metzger, Marc M. Oshiro, Ken Youens-Clark, Donna M. Wolk, Dalia Dhingra, Marvin J. Slepian, Bonnie L. Hurwitz, Lee D. Cranmer
Publikováno v:
Journal of Applied Microbiology
Aims Test the choice of 16S rRNA gene amplicon and data analysis method on the accuracy of identification of clinically important bacteria utilizing a benchtop sequencer. Methods and Results Nine 16S rRNA amplicons were tested on an Ion Torrent PGM t
Autor:
Ken Youens-Clark
Updated in 2024: A new version has been released that simplifies the programs used in the book, based on changes in the Rust language and crates since original publication. The code has been updated to reflect version 4 of the clap crate. For several
Autor:
Ken Youens-Clark
Life scientists today urgently need training in bioinformatics skills. Too many bioinformatics programs are poorly written and barely maintained, usually by students and researchers who've never learned basic programming skills. This practical guide
Autor:
David M. Kristensen, Shane Levi, Ward Deboutte, Vikas Peddu, Ben Busby, Jan P. Buchmann, Eldred Ribeiro, Vadim Zalunin, Rodney Brister, Benjamin P. Kellman, Margaret Henderson, Adrian Cantu, Carl Leubsdorf, Cody Glickman, Migun Shakya, Bert Vanmechelen, Lindsay Rutter, Ryan C. Shean, Lydia Fleischmann, Juan S. Andrade-Martínez, Sanzhima Garmaeva, Alise J. Ponsero, Benjamin J. Tully, Laura M. Forero-Junco, Alexandre Efremov, Kyle Levi, Surya Saha, Farrah Roy, Ken Youens-Clark, Michael J. Tisza, Christopher J R Turkington, Robert Edwards, Michael D’Amour, Melissa Giluso, Matthew A. Miller, Ryan Connor, Joan Martí-Carreras, Suman B. Pakala
Publikováno v:
Genes, Vol 10, Iss 9, p 714 (2019)
Genes
Genes, 10(9):714. MDPI AG
Volume 10
Issue 9
Genes
Genes, 10(9):714. MDPI AG
Volume 10
Issue 9
A wealth of viral data sits untapped in publicly available metagenomic data sets when it might be extracted to create a usable index for the virological research community. We hypothesized that work of this complexity and scale could be done in a hac