Average Nucleotide Identity and Digital DNA-DNA Hybridization Analysis Following PromethION Nanopore-Based Whole Genome Sequencing Allows for Accurate Prokaryotic Typing

Autor: Nick Versmessen, Marieke Mispelaere, Marjolein Vandekerckhove, Cedric Hermans, Jerina Boelens, Katleen Vranckx, Filip Van Nieuwerburgh, Mario Vaneechoutte, Paco Hulpiau, Piet Cools

Publikováno v: Diagnostics, Vol 14, Iss 16, p 1800 (2024)

Whole-genome sequencing (WGS) is revolutionizing clinical bacteriology. However, bacterial typing remains investigated by reference techniques with inherent limitations. This stresses the need for alternative methods providing robust and accurate seq

Externí odkaz: https://doaj.org/article/73acf6921a3b400fb8de34ac3161dc25

WGS-Based Prediction and Analysis of Antimicrobial Resistance in Campylobacter jejuni Isolates From Israel

Autor: Assaf Rokney, Lea Valinsky, Katleen Vranckx, Noa Feldman, Vered Agmon, Jacob Moran-Gilad, Miriam Weinberger

Publikováno v: Frontiers in Cellular and Infection Microbiology, Vol 10 (2020)

Rapid developments in the field of whole genome sequencing (WGS) make in silico antimicrobial resistance (AMR) a target within reach. Campylobacter jejuni is a leading cause of foodborne infections in Israel with increasing rates of resistance. We ap

Externí odkaz: https://doaj.org/article/295507571dac4881a5a974629eff43d5

Low prevalence of human enteropathogenic Yersinia spp. in brown rats (Rattus norvegicus) in Flanders.

Autor: Lieze Oscar Rouffaer, Kristof Baert, Anne-Marie Van den Abeele, Ivo Cox, Gerty Vanantwerpen, Lieven De Zutter, Diederik Strubbe, Katleen Vranckx, Luc Lens, Freddy Haesebrouck, Michel Delmée, Frank Pasmans, An Martel

Publikováno v: PLoS ONE, Vol 12, Iss 4, p e0175648 (2017)

Brown rats (Rattus norvegicus) have been identified as potential carriers of Yersinia enterocolitica and Y. pseudotuberculosis, the etiological agents of yersiniosis, the third most reported bacterial zoonosis in Europe. Enteropathogenic Yersinia spp

Externí odkaz: https://doaj.org/article/06a679f6dfee4e169c72953ab2df70d5

First Large-Scale Study of Antimicrobial Susceptibility Data, And Genetic Resistance Determinants, In Fusobacterium Necrophorum Highlighting the Importance of Continuing Focused Susceptibility Trend Surveillance

Autor: Michael D. Perry, Katleen Vranckx, Sarah Copsey-Mawer, Selina Scotford, Bethan Anderson, Philip Day, Joanne Watkins, Sally Corden, Harriet Hughes, Trefor E. Morris

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1735102b732afaa7e15091e3e4595d1d
https://doi.org/10.2139/ssrn.4288718

MALDI-TOF MS as a promising tool to assess potential virulence of Vibrio tapetis isolates

Autor: Katleen Vranckx, Filip Boyen, Annemie Decostere, Maaike Vercauteren, Adeline Bidault, Alexandra Rahmani, Koen Chiers, Vianney Pichereau, Christine Paillard

Publikováno v: Aquaculture
Aquaculture, Elsevier, 2021, 530, pp.735729. ⟨10.1016/j.aquaculture.2020.735729⟩
Aquaculture, 2021, 530, pp.735729. ⟨10.1016/j.aquaculture.2020.735729⟩
Aquaculture (0044-8486) (Elsevier BV), 2021-01, Vol. 530, P. 735729 (9p.)

Vibrio tapetis, the etiological agent of Brown Ring Disease, mainly affects the Manila clam Ruditapes philippinarum. Although this bacterium is mainly known as a clam pathogen, it has been isolated from several fish species. The main aim of the prese

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb67b12b300749c61205783443bd0538
https://doi.org/10.1016/j.aquaculture.2020.735729