A dynamic web resource for robust and reproducible genomics in nonmodel species: marineomics.io

Autor: Samuel N. Bogan, Jason Johns, Joanna S. Griffiths, Danielle Davenport, Sara J. Smith, Sara M. Schaal, Alan Downey‐Wall, Runyang Nicolas Lou, Katie Lotterhos, Megan E. Guidry, Hanny E. Rivera, Joseph A. McGirr, Jonathan B. Puritz, Steven B. Roberts, Katherine Silliman

Publikováno v: Methods in Ecology and Evolution, Vol 14, Iss 11, Pp 2709-2716 (2023)

Abstract Genomic methods are becoming increasingly valuable and established in ecological research, particularly in nonmodel species. Supporting their progress and adoption requires investment in resources that promote (i) reproducibility of genomic

Externí odkaz: https://doaj.org/article/cde1c857c1504032b235abd271f5f730

Complex introgression among three diverged largemouth bass lineages

Autor: Katherine Silliman, Honggang Zhao, Megan Justice, Wilawan Thongda, Bryant Bowen, Eric Peatman

Publikováno v: Evolutionary Applications, Vol 14, Iss 12, Pp 2815-2830 (2021)

Abstract Hybrid zones between diverged lineages offer a unique opportunity to study evolutionary processes related to speciation. Natural and anthropogenic hybridization in the black basses (Micropterus spp.) is well documented, including an extensiv

Externí odkaz: https://doaj.org/article/fb5b164b4afa45ff87314b1599c06727

Population structure, genetic connectivity, and adaptation in the Olympia oyster (Ostrea lurida) along the west coast of North America

Autor: Katherine Silliman

Publikováno v: Evolutionary Applications, Vol 12, Iss 5, Pp 923-939 (2019)

Abstract Effective management of threatened and exploited species requires an understanding of both the genetic connectivity among populations and local adaptation. The Olympia oyster (Ostrea lurida), patchily distributed from Baja California to the

Externí odkaz: https://doaj.org/article/dfae12ecdb4649f89612c7189b94d7dc

Magnitude and Predictability of pH Fluctuations Shape Plastic Responses to Ocean Acidification

Autor: Katherine Silliman, Catherine A. Pfister, Jean-Pierre Gattuso, Lydia Kapsenberg, Mark C. Bitter

Publikováno v: Digital.CSIC. Repositorio Institucional del CSIC
instname
Digital.CSIC: Repositorio Institucional del CSIC
Consejo Superior de Investigaciones Científicas (CSIC)
The American Naturalist
The American Naturalist, The American Society of Naturalists, 2021, ⟨10.1086/712930⟩

16 pages, 5 figures, supplemental material https://www.journals.uchicago.edu/doi/suppl/10.1086/712930.-- Data and Code Availability: All raw data and referenced supplemental files in this article have been deposited in the Dryad Digital Repository (h

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7df5b860122d826828219c2186793936
https://doi.org/10.1086/712930

Base-substitution mutation rate across the nuclear genome ofAlpheussnapping shrimp and the timing of isolation by the Isthmus of Panama

Autor: Carla Hurt, Nancy Knowlton, Jane L. Indorf, Katherine Silliman, William E. Browne

The formation of the Isthmus of Panama and final closure of the Central American Seaway (CAS) provides an independent calibration point for examining the rate of DNA substitutions. This vicariant event has been widely used to estimate the substitutio

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::8cc5a4ea8aeb2a3aa99200501c133b6d
https://doi.org/10.1101/2020.11.25.396556