Výsledky vyhledávání - "Katherine E. Berry"

Biochemical and genetic dissection of the RNA-binding surface of the FinO domain ofEscherichia coliProQ

Autor: Ewa M. Stein, Suxuan Wang, Katherine Dailey, Chandra M Gravel, Shiying Wang, Mikołaj Olejniczak, Katherine E Berry

RNA-binding proteins play important roles in bacterial gene regulation through interactions with both coding and non-coding RNAs. ProQ is a FinO-domain protein that binds a large set of RNAs inEscherichia coli, though the details of how ProQ binds th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::56467141d8bcfb34b1da1e7f99af5b52
https://doi.org/10.1101/2023.04.25.538249

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Optimization of a bacterial three-hybrid assay through in vivo titration of an RNA–DNA adapter protein

Autor: Chandra M Gravel, Clara Wang, Hannah LeBlanc, Katherine E. Berry, Rachel Mansky

Publikováno v: RNA

Noncoding RNAs regulate gene expression in every domain of life. In bacteria, small RNAs (sRNAs) regulate gene expression in response to stress and are often assisted by RNA–chaperone proteins, such as Hfq. We have recently developed a bacterial th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5eddbafd2936767369a0e241ec61b8c5
https://doi.org/10.1261/rna.077404.120

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Optimization of a bacterial three-hybrid assay through in vivo titration of an RNA-DNA adapter-protein

Autor: Hannah LeBlanc, Clara Wang, Katherine E. Berry, Rachel Mansky, Chandra M Gravel

Non-coding RNAs regulate gene expression in every domain of life. In bacteria, small RNAs (sRNAs) regulate gene expression in response to stress and are often assisted by RNA-chaperone proteins, such as Hfq. We have recently developed a bacterial thr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f78d0f754e0e7d6e55b1946d4662146a
https://doi.org/10.1101/2020.07.23.216291

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Determinants of RNA recognition by the FinO domain of the Escherichia coli ProQ protein

Autor: Ewa M Stein, Mikołaj Olejniczak, Maciej M Basczok, Katherine E. Berry, Joanna Kwiatkowska, Chandra M Gravel

Publikováno v: Nucleic Acids Research

The regulation of gene expression by small RNAs inEscherichia colidepends on RNA binding proteins Hfq and ProQ, which bind mostly distinct RNA pools. To understand how ProQ discriminates between RNA substrates, we compared its binding to six differen

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::52c7c62524988ba2bcbbc7582454fb56

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The Primal Scene Phenomenon: Witnessing Parental Sexual Activity and Sociosexual Orientation

Autor: Arthur D. Marsden, Michael D. Barnett, Katherine E. Berry, Idalia V. Maciel

Publikováno v: Sexuality & Culture. 22:162-175

Sigmund Freud coined the term urszene—or “primal scene”—to describe the experience of children witnessing their parents engaging in sexual activity. We examined the historical context in which the primal scene emerged, considered contemporary

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::bd38a6a611b9a7a7a044362c4c3c4177
https://doi.org/10.1007/s12119-017-9458-2

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Genetic identification of the functional surface for RNA binding by Escherichia coli ProQ

Autor: Smriti Pandey, Clara Wang, Oliver M Stockert, Hannah LeBlanc, Katherine E. Berry, Courtney L Hegner, Chandra M Gravel

Publikováno v: Nucleic Acids Research

The FinO-domain-protein ProQ is an RNA-binding protein that has been known to play a role in osmoregulation in proteobacteria. Recently, ProQ has been shown to act as a global RNA-binding protein in Salmonella and E. coli, binding to dozens of small

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99ca781e6ce884b1944120f09ab14d4d
https://doi.org/10.1101/822791

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